Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-452   MET-453  2.9 2.9 -1.9 0.3 76.9 77.1 -27.2
 MET-453   ASN-454  0.7 0.7 -4.1 1.6 40.6 40.3 37.2
 ASN-454   ASN-455  3.7 3.6 1.8 0.0 116.8 115.7 -6.3
 ASN-455   GLY-456  5.1 5.1 0.5 -2.7 148.9 148.1 21.1
 GLY-456   THR-457  5.8 5.7 2.2 -0.9 151.8 152.1 -16.6
 THR-457   TYR-458  3.4 3.3 -4.2 3.9 93.8 93.9 52.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  2.2 2.0 0.8 -1.3 148.8 147.4 23.1
 ASP-477   VAL-478  5.1 5.0 1.4 -0.8 111.5 109.6 -25.0
 VAL-478   PRO-479  6.4 6.3 0.2 1.2 133.1 132.8 -14.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees