Dihydrodipicolinate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-12   LEU-13  8.1 8.1 -3.1 5.9 120.5 121.3 44.7
 LEU-13   ILE-14  4.9 4.9 -3.9 5.2 135.0 135.0 -47.8
 ILE-14   THR-15  5.2 5.2 -7.0 5.5 67.0 67.1 86.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-23   GLU-24  11.1 11.0 2.6 1.6 33.6 31.6 76.1
 GLU-24   GLN-25  10.6 10.7 -5.0 5.7 94.9 96.7 45.8
 GLN-25   SER-26  10.6 10.7 -5.7 1.6 58.7 63.4 -18.2
 SER-26   TYR-27  7.9 7.9 -2.0 2.0 122.0 121.1 -131.9
 TYR-27   ALA-28  5.7 5.7 2.0 -0.3 133.9 134.5 -201.5
 TYR-27   ALA-28  5.7 5.7 2.0 -0.3 133.9 134.5 -201.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-27   ALA-28  5.7 5.7 2.0 -0.3 133.9 134.5 -201.5
 TYR-27   ALA-28  5.7 5.7 2.0 -0.3 133.9 134.5 -201.5
 ALA-28   ARG-29  6.2 6.1 1.3 -7.6 66.9 67.4 65.5
 ARG-29   LEU-30  6.9 6.8 6.4 -1.0 76.3 72.9 99.7
 LEU-30   ILE-31  3.5 3.4 5.0 -4.8 142.5 143.0 -53.5
 ILE-31   LYS-32  2.3 2.3 1.8 0.2 111.6 110.9 43.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-41   VAL-42  7.0 7.1 -1.2 3.1 147.7 148.0 177.4
 VAL-42   VAL-43  5.2 5.2 1.8 -4.5 99.2 99.9 9.6
 VAL-43   PRO-44  7.4 7.4 0.9 -0.8 60.5 58.6 56.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-46   THR-47  12.0 11.8 -4.6 -0.6 17.7 23.6 368.5
 THR-47   THR-48  13.4 13.6 0.6 2.7 128.8 128.7 28.0
 THR-48   GLY-49  10.1 10.2 0.6 -2.5 83.5 84.3 55.2
 GLY-49   GLU-50  9.2 9.2 -1.3 4.8 106.6 104.2 32.5
 GLY-49   GLU-50  9.2 9.2 -1.3 4.8 106.6 104.2 32.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-49   GLU-50  9.2 9.2 -1.3 4.8 106.6 104.2 32.5
 GLY-49   GLU-50  9.2 9.2 -1.3 4.8 106.6 104.2 32.5
 GLU-50   SER-51  12.5 12.5 -0.8 2.4 42.6 41.4 21.4
 SER-51   ALA-52  14.4 14.4 -1.0 -0.4 104.9 106.5 109.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-65   ALA-66  7.0 7.0 -0.9 2.6 96.3 95.6 -106.4
 ALA-66   VAL-67  3.5 3.6 0.1 0.4 21.6 20.6 7.3
 VAL-67   GLU-68  3.5 3.7 3.1 -2.8 79.4 80.1 118.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-265   ILE-266  5.0 5.0 1.5 4.1 105.8 104.7 -183.7
 ILE-266   GLU-267  5.2 5.1 -0.1 -2.5 143.2 140.3 40.6
 GLU-267   SER-268  8.3 8.3 -2.1 9.8 136.7 134.6 239.6
 SER-268   LEU-269  8.1 8.4 -10.6 7.2 87.7 93.7 -110.2
 LEU-269   GLU-270  6.7 6.8 2.7 -9.0 92.6 93.5 -117.5
 GLU-270   PHE-271  10.0 9.9 -1.4 4.0 51.6 50.9 -23.9
 PHE-271   ARG-272  11.6 11.6 2.9 -2.9 101.5 103.6 -111.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees