Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
6.1
6.2
-12.0
-11.9
41.4
39.3
60.1
THR-107
LEU-108
3.4
4.0
-24.6
18.2
117.9
113.9
-30.7
LEU-108
GLY-109
0.5
1.3
-19.2
0.1
40.7
48.2
50.0
GLY-109
ILE-110
3.7
3.9
-4.0
17.0
115.9
121.7
15.5
ILE-110
SER-111
7.2
7.2
-2.2
4.0
104.0
104.4
0.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-209
LEU-210
11.7
11.6
1.8
9.3
76.5
74.0
17.3
LEU-210
ILE-211
8.4
8.3
-1.8
-7.0
155.5
144.3
-38.8
ILE-211
ASP-212
8.9
9.1
-6.2
18.3
131.0
132.3
48.6
ASP-212
SER-213
5.4
5.7
7.9
-6.3
118.7
109.7
-5.1
SER-213
LYS-214
2.2
2.2
16.9
-0.8
78.7
82.6
40.0
LYS-214
GLY-215
1.6
1.6
-26.8
22.8
37.9
48.4
5.8
GLY-215
TYR-216
4.3
4.5
-16.3
5.2
71.3
66.3
36.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees