Chitin Oligosaccharide Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-240   PRO-241  7.2 7.4 -3.9 4.1 48.5 45.3 3.2
 PRO-241   ALA-242  7.2 7.2 -18.4 5.7 70.8 76.1 15.2
 ALA-242   ALA-243  4.5 4.0 5.0 -8.0 130.3 135.9 11.4
 ALA-243   GLY-244  1.6 2.0 -15.2 -19.5 64.5 68.2 25.7
 GLY-244   THR-245  2.0 2.2 40.7 1.9 63.5 54.6 45.8
 THR-245   GLN-246  5.2 5.5 7.4 -1.4 66.4 63.6 -2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-482   MET-483  10.7 10.8 11.5 -12.2 100.2 102.9 2.1
 MET-483   SER-484  7.1 7.2 -2.0 0.6 133.2 133.5 0.2
 SER-484   GLY-485  3.8 3.9 -18.9 -23.2 49.5 47.5 54.3
 GLY-485   ALA-486  1.1 1.9 24.8 -29.0 98.5 77.2 9.6
 ALA-486   TRP-487  2.6 3.0 10.8 17.3 68.1 82.6 16.2
 TRP-487   MET-488  6.0 6.6 -43.4 31.1 34.4 31.7 17.5
 MET-488   TYR-489  8.3 8.1 7.1 5.7 78.8 77.1 5.9
 TYR-489   GLN-490  11.4 11.5 7.2 -1.5 144.9 143.6 -9.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees