Major Prion Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-130
GLY-131
5.4
5.0
13.1
-3.9
83.1
85.2
61.6
GLY-131
SER-132
3.2
3.4
12.5
4.2
80.2
82.2
21.7
SER-132
ALA-133
1.7
2.4
-4.7
-6.6
33.7
39.8
34.3
ALA-133
MET-134
3.3
3.2
-9.9
29.5
62.5
55.4
-80.2
MET-134
SER-135
5.1
4.9
-13.8
-13.9
43.0
64.6
160.1
SER-135
ARG-136
7.7
8.0
27.0
15.7
142.1
158.1
-253.4
ARG-136
PRO-137
6.1
7.6
-16.1
-2.9
40.7
55.5
69.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-143
ASP-144
6.7
5.9
29.8
5.7
58.2
57.5
146.6
ASP-144
TYR-145
10.1
9.6
-8.8
5.8
132.3
117.1
-17.6
TYR-145
GLU-146
11.5
10.4
7.9
-3.7
29.9
27.8
28.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-159
GLN-160
3.9
4.1
-7.3
1.1
47.1
44.1
31.5
GLN-160
VAL-161
1.5
2.1
-26.7
17.3
109.7
108.0
13.8
VAL-161
TYR-162
3.9
4.0
-8.6
5.0
44.2
45.6
-3.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-188
VAL-189
15.4
14.6
17.0
-7.4
39.3
47.8
33.0
VAL-189
THR-190
17.2
16.8
19.3
-13.4
62.8
59.9
2.4
THR-190
THR-191
15.3
15.3
-2.3
0.4
65.4
55.9
-46.6
THR-191
THR-192
16.6
16.2
-117.8
6.0
90.3
80.7
60.6
GLU-196
ASN-197
21.8
20.2
125.7
168.7
85.7
116.4
-140.2
ASN-197
PHE-198
18.0
18.9
-78.9
-25.8
28.0
60.4
528.7
PHE-198
THR-199
15.6
15.6
-8.2
24.7
29.7
27.7
-107.5
THR-199
GLU-200
15.6
15.7
-4.7
-9.8
76.4
75.6
43.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-208
VAL-209
2.5
2.6
-12.4
-5.0
41.6
36.2
52.0
VAL-209
VAL-210
1.1
0.8
-3.5
-4.3
42.3
37.6
25.4
VAL-210
GLU-211
3.1
3.1
12.5
-5.7
79.0
81.7
-12.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees