Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
8.3
7.6
17.3
-4.3
106.3
110.6
-33.9
LEU-108
GLY-109
4.8
4.0
-10.3
20.9
141.8
141.5
21.9
GLY-109
ILE-110
2.2
1.7
-54.1
30.0
65.2
70.3
32.1
ILE-110
SER-111
3.3
3.1
3.2
-23.1
116.4
109.2
19.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-208
GLY-209
11.9
12.1
43.1
-42.1
94.7
86.5
-15.5
GLY-209
LEU-210
10.6
9.7
2.8
21.0
101.5
109.2
-18.5
LEU-210
ILE-211
7.1
6.4
8.2
9.3
159.8
156.5
-54.6
ILE-211
ASP-212
5.9
6.0
178.7
153.5
105.5
132.8
7.2
ASP-212
SER-213
2.9
3.2
139.7
-98.9
67.1
59.2
104.6
SER-213
LYS-214
4.7
3.9
-0.5
11.0
82.8
76.9
-4.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees