Pseudomonas Aeruginosa Earp

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-193   ASN-194  17.7 18.2 -8.5 7.9 156.6 155.8 33.2
 ASN-194   PRO-195  17.4 17.4 -7.7 -2.9 130.5 137.1 -91.5
 PRO-195   ALA-196  18.4 18.3 3.5 6.7 46.0 44.7 110.1
 ALA-196   LEU-197  15.6 15.6 -4.0 -6.6 68.6 73.4 -61.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-201   GLU-202  8.0 8.1 1.1 -1.1 140.1 138.9 32.9
 GLU-202   GLN-203  8.7 8.8 1.3 -2.9 121.5 121.7 26.8
 GLN-203   LEU-204  5.7 5.9 1.2 0.2 60.0 59.2 -41.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-208   GLN-209  4.9 4.6 -8.6 -2.5 33.1 30.0 172.2
 GLN-209   PRO-210  5.2 5.0 7.1 -3.0 142.0 141.8 -121.2
 PRO-210   SER-211  5.0 4.7 0.7 0.0 129.7 128.9 6.9
 SER-211   LEU-212  2.3 2.1 -0.8 -0.2 30.9 31.1 8.6
 LEU-212   LEU-213  2.2 2.0 -2.9 4.8 72.2 71.2 -1.6
 LEU-212   LEU-213  2.2 2.0 -2.9 4.8 72.2 71.2 -1.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-212   LEU-213  2.2 2.0 -2.9 4.8 72.2 71.2 -1.6
 LEU-212   LEU-213  2.2 2.0 -2.9 4.8 72.2 71.2 -1.6
 LEU-213   LEU-214  1.9 2.1 -6.6 5.9 14.4 12.2 38.1
 LEU-214   VAL-215  2.3 2.3 -1.5 8.5 75.3 74.8 -0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-243   LEU-244  6.2 6.1 0.4 -0.5 35.0 35.1 12.6
 LEU-244   ARG-245  5.1 5.1 -0.2 2.3 145.9 146.4 2.4
 ARG-245   VAL-246  5.9 5.8 0.7 -0.7 53.1 54.5 -26.0
 VAL-246   GLN-247  5.6 5.6 -0.4 1.7 158.4 159.4 47.0
 GLN-247   VAL-248  5.0 5.0 -5.4 -0.1 126.1 124.9 -80.2
 VAL-248   LEU-249  5.6 5.9 -0.4 -20.3 135.1 139.8 -375.3
 LEU-249   PRO-250  3.1 3.6 11.2 8.8 24.8 41.7 357.3
 PRO-250   PHE-251  3.5 4.8 -13.0 -17.2 97.6 81.6 -137.5
 ALA-253   GLN-254  9.1 8.9 -12.4 1.0 46.0 43.4 157.2
 GLN-254   ASP-255  12.2 12.1 1.9 -1.1 105.7 107.9 -47.0
 ASP-255   ASP-256  12.3 12.3 1.2 1.7 120.4 120.4 -43.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees