Hydrolase, Haloacid Dehalogenase Family

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-4   TYR-5  12.0 12.0 9.9 2.3 21.1 24.7 212.9
 TYR-5   GLN-6  10.2 10.3 -1.1 -3.6 97.7 101.1 -26.7
 GLN-6   GLY-7  12.8 12.8 -0.8 -3.5 127.8 132.0 -31.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-38   PRO-39  15.3 15.1 -24.5 12.2 20.9 31.5 210.0
 PRO-39   PHE-40  14.4 14.6 13.2 0.6 95.2 96.1 -126.3
 PHE-40   LEU-41  11.7 11.8 14.4 -13.6 145.7 149.5 -20.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-44   ASN-45  9.6 9.4 5.7 -0.4 23.4 25.3 94.8
 ASN-45   ASN-46  9.5 9.5 -8.4 12.3 112.6 109.9 35.5
 ASN-46   THR-47  13.2 13.2 14.3 -13.4 46.2 42.2 -18.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-72   THR-73  11.0 10.9 17.0 -11.7 102.5 100.6 -69.8
 THR-73   ALA-74  10.6 10.6 -6.8 2.5 43.1 46.2 84.1
 ALA-74   THR-75  8.4 8.3 -9.3 7.7 25.7 25.9 58.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-181   GLY-182  3.8 3.8 -5.0 -9.3 6.4 6.6 250.5
 GLY-182   LYS-183  5.3 5.0 7.5 2.7 128.7 131.0 -158.2
 LYS-183   PRO-184  4.5 4.6 -7.9 1.7 98.3 95.2 -59.4
 PRO-184   LYS-185  4.7 4.6 -7.9 11.8 133.4 133.5 46.4
 LYS-185   ALA-186  3.5 3.6 5.4 -9.0 95.1 95.2 4.9
 ALA-186   ILE-187  3.2 3.1 2.2 -1.4 65.8 64.7 -26.1
 ILE-187   ILE-188  1.8 1.7 0.2 1.6 125.9 125.7 -22.5
 ILE-188   MET-189  3.0 2.9 1.8 -6.6 140.2 138.5 72.3
 MET-189   GLU-190  2.9 3.0 8.4 -6.2 76.2 75.5 -23.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-191   ALA-192  7.3 7.2 -0.4 0.3 27.8 25.6 -2.0
 ALA-192   ILE-193  7.3 7.1 6.2 -4.8 118.5 119.6 58.2
 ILE-193   ALA-194  8.7 8.6 -7.3 3.1 117.4 112.6 -25.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-195   LEU-196  12.4 12.5 14.4 -19.6 14.9 13.0 -101.0
 LEU-196   GLY-197  11.9 11.9 17.1 -27.9 85.5 82.0 -37.8
 GLY-197   VAL-198  14.5 14.5 -18.5 34.2 119.4 127.8 215.4
 VAL-198   GLU-199  13.8 13.9 -9.2 17.8 68.2 66.7 -4.3
 GLU-199   LYS-200  12.8 13.6 0.1 -13.9 53.7 67.1 -167.3
 LYS-200   GLU-201  10.0 10.6 5.8 -22.9 26.6 27.2 -322.0
 GLU-201   GLN-202  12.1 11.9 23.8 -1.8 36.6 34.7 402.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-205   VAL-206  1.8 1.9 3.9 -3.2 40.9 42.4 21.7
 VAL-206   GLY-207  3.2 3.3 -3.0 1.9 67.4 68.4 17.7
 GLY-207   ASP-208  5.8 5.8 2.8 -0.1 57.3 58.1 44.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-212   ASP-213  7.6 7.8 1.6 -13.6 117.6 112.8 112.3
 ASP-213   ILE-214  5.0 5.0 3.2 4.5 108.8 110.8 -69.6
 ILE-214   GLN-215  5.1 5.1 -9.9 5.7 135.6 135.1 -7.3
 GLN-215   SER-216  6.6 6.7 -2.6 -8.5 120.8 125.3 -76.3
 SER-216   GLY-217  3.1 3.4 13.9 -4.9 111.6 116.1 -51.1
 GLY-217   ILE-218  4.0 3.8 -2.2 -8.7 99.7 95.3 -79.4
 ILE-218   GLN-219  7.7 7.6 10.6 -0.4 18.9 18.1 205.8
 GLN-219   ASN-220  7.6 7.6 3.3 -5.1 73.2 67.3 19.6
 ASN-220   GLY-221  6.7 6.7 7.5 -11.0 127.4 130.0 84.7
 GLY-221   ILE-222  8.9 8.9 1.0 5.4 122.5 120.2 -82.0
 ILE-222   ASP-223  6.4 6.4 0.9 4.2 146.3 147.2 -96.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-232   PRO-233  13.7 13.4 -1.3 -10.1 10.5 9.1 256.0
 PRO-233   LYS-234  14.8 14.7 4.1 5.0 119.4 120.8 -201.4
 LYS-234   SER-235  12.9 13.3 -16.5 7.7 76.3 83.7 15.7
 SER-235   ALA-236  16.2 16.6 10.1 -0.7 46.7 43.4 176.8
 ALA-236   VAL-237  15.9 16.1 -20.0 2.1 90.2 87.8 -101.5
 VAL-237   PRO-238  12.8 13.1 5.3 19.8 88.0 99.8 -146.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-239   LEU-240  17.8 17.8 34.4 -6.2 146.2 148.5 -452.0
 LEU-240   PRO-241  14.8 14.9 12.9 -4.6 114.0 114.0 -18.0
 PRO-241   THR-242  15.8 15.8 -12.5 2.7 105.2 110.9 -6.2
 THR-242   PRO-243  13.3 13.4 5.5 -0.1 55.1 62.7 78.4
 PRO-243   PRO-244  10.9 10.7 11.8 -2.3 107.0 110.0 -51.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees