Nad-Specific Glutamate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-182
ILE-183
2.6
2.1
-10.8
10.6
82.3
84.7
1.4
ILE-183
VAL-184
4.5
4.4
22.7
-11.7
85.2
84.6
54.3
VAL-184
GLY-185
4.6
4.2
8.2
2.7
121.5
126.8
-38.4
GLY-185
GLY-186
2.8
3.4
25.7
-73.8
56.6
65.6
-301.9
GLY-186
PHE-187
4.8
5.0
-114.1
-142.0
112.9
133.2
704.8
PHE-187
TYR-188
3.2
5.6
-158.8
116.9
129.7
149.6
-391.0
TYR-188
ASN-189
5.2
5.3
165.2
77.5
75.5
55.6
-569.8
ASN-189
GLY-190
6.2
4.8
-108.0
-144.7
140.0
167.7
1007.9
GLY-190
VAL-191
5.1
4.6
-94.6
2.6
115.4
97.5
-290.8
VAL-191
LEU-192
2.2
1.5
-59.4
121.5
155.4
124.7
542.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-363
MET-364
12.0
11.7
8.6
5.9
16.2
19.5
279.2
MET-364
VAL-365
12.1
11.9
-0.8
-10.1
119.4
121.8
-233.3
VAL-365
VAL-366
9.7
9.7
-8.9
0.0
148.4
148.2
3.5
VAL-366
ALA-367
9.5
9.7
-13.7
8.8
133.2
132.2
-32.2
ALA-367
PRO-368
8.0
7.9
-14.7
14.6
137.5
139.6
-1.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-377
LEU-378
3.9
3.9
8.7
-19.2
98.6
93.7
-9.2
LEU-378
VAL-379
5.8
5.6
28.6
-25.0
36.4
42.4
-54.8
VAL-379
VAL-380
8.4
8.1
31.4
-25.6
33.3
29.9
131.6
VAL-380
GLY-381
5.9
5.2
22.5
-15.2
91.9
94.0
-30.1
VAL-380
GLY-381
5.9
5.2
22.5
-15.2
91.9
94.0
-30.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-380
GLY-381
5.9
5.2
22.5
-15.2
91.9
94.0
-30.1
VAL-380
GLY-381
5.9
5.2
22.5
-15.2
91.9
94.0
-30.1
GLY-381
PHE-382
5.8
5.6
-18.6
7.3
80.1
71.5
54.5
PHE-382
GLU-383
9.4
9.2
-42.8
62.1
15.9
10.0
-232.0
THR-394
ALA-395
19.3
19.8
-45.5
24.1
120.9
133.4
-230.4
ALA-395
GLU-396
19.2
19.0
-8.6
47.4
166.9
157.8
454.1
GLU-396
GLU-397
19.8
20.5
-29.6
2.7
103.7
101.8
-235.1
GLU-397
VAL-398
18.5
18.5
-25.2
11.6
106.0
104.2
-145.2
VAL-398
ASP-399
15.6
15.2
46.9
-47.6
23.7
26.9
22.3
ASP-399
SER-400
16.4
16.1
0.6
-8.6
45.0
38.8
-69.6
SER-400
LYS-401
16.9
17.2
30.0
-12.2
77.3
79.8
128.6
LYS-401
LEU-402
13.8
14.2
7.5
2.5
70.2
68.3
58.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-408
ILE-409
8.5
8.7
1.6
-3.4
93.0
94.1
49.0
ILE-409
HIS-410
4.9
5.0
6.3
-4.5
152.9
154.2
-3.4
HIS-410
ASP-411
5.1
5.5
-3.5
1.8
44.4
44.2
24.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees