P21-Activated Kinase 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-315   ASP-316  12.2 11.9 -6.0 11.8 106.3 105.6 81.0
 ASP-316   PRO-317  9.2 9.3 1.4 -2.0 91.6 94.2 43.8
 PRO-317   ARG-318  5.6 5.7 8.5 -6.0 128.4 123.2 16.2
 ARG-318   SER-319  5.2 4.9 0.2 11.0 156.5 153.3 -66.4
 SER-319   TYR-320  5.1 5.0 1.7 7.7 92.0 87.7 46.2
 TYR-320   LEU-321  3.3 3.2 -23.1 1.8 120.1 108.7 -25.4
 LEU-321   ASP-322  0.1 0.2 -3.8 5.7 66.4 65.9 -12.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-326   ILE-327  10.4 10.5 2.3 10.2 119.8 127.6 0.1
 ILE-327   GLY-328  11.0 10.6 -11.0 -6.6 10.6 21.9 107.9
 GLY-328   GLU-329  10.3 10.4 -8.3 57.8 80.4 80.6 -93.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-334   VAL-335  8.3 8.6 1.1 -6.0 109.2 106.6 2.4
 VAL-335   CYS-336  5.9 6.0 -1.9 1.2 35.4 39.6 42.7
 CYS-336   ILE-337  6.3 6.4 14.5 -21.8 107.8 101.0 96.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-339   VAL-340  5.4 5.6 8.7 -9.7 66.9 66.4 -3.3
 VAL-340   ARG-341  4.8 4.7 10.3 5.6 12.6 14.7 152.0
 ARG-341   SER-342  3.8 4.3 -13.2 0.6 122.5 112.6 -89.2
 SER-342   SER-343  6.9 7.5 5.8 8.7 96.9 106.0 20.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-367   VAL-368  10.3 10.0 -25.0 30.0 94.2 104.2 52.0
 VAL-368   ILE-369  13.5 13.1 9.3 -4.4 57.3 60.7 -31.2
 ILE-369   MET-370  12.8 11.5 2.8 31.5 112.9 127.7 -57.7
 MET-370   ARG-371  10.9 9.8 -46.7 -5.2 19.9 53.9 348.5
 ARG-371   ASP-372  12.7 12.9 -172.7 -162.1 90.4 119.3 200.6
 ASP-372   TYR-373  14.6 15.5 -33.7 -46.6 140.5 130.4 -447.9
 TYR-373   GLN-374  13.8 14.4 -70.6 55.4 70.5 74.6 20.3
 GLN-374   HIS-375  14.9 14.1 29.4 -0.5 37.8 54.9 158.9
 HIS-375   GLU-376  15.2 14.9 4.1 6.1 104.3 115.2 -28.9
 GLU-376   ASN-377  15.9 16.0 -0.2 -2.1 113.3 108.5 -11.9
 ASN-377   VAL-378  13.5 13.5 3.5 2.6 87.5 88.7 -2.2
 ASN-377   VAL-378  13.5 13.5 3.5 2.6 87.5 88.7 -2.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-377   VAL-378  13.5 13.5 3.5 2.6 87.5 88.7 -2.2
 ASN-377   VAL-378  13.5 13.5 3.5 2.6 87.5 88.7 -2.2
 VAL-378   VAL-379  10.4 10.4 5.5 7.7 15.6 14.8 114.6
 VAL-379   GLU-380  8.3 8.4 13.8 -13.6 65.8 57.2 -9.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-395   GLU-396  4.5 4.4 -5.5 -7.2 70.9 65.8 -31.5
 GLU-396   PHE-397  7.5 7.4 13.2 -4.7 79.9 74.5 41.7
 PHE-397   LEU-398  7.9 8.1 0.8 -0.6 57.5 60.4 54.4
 LEU-398   GLU-399  10.3 10.8 19.9 -3.4 98.8 91.0 0.9
 GLU-399   GLY-400  12.8 13.7 -4.7 5.3 132.0 141.7 -5.4
 GLY-400   GLY-401  14.8 15.0 -8.0 -7.1 124.0 118.2 -67.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees