Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
7.4
7.5
-10.9
-10.0
38.9
37.6
60.9
THR-107
LEU-108
5.0
5.5
-3.4
-1.5
115.2
113.0
-40.9
LEU-108
GLY-109
1.5
2.6
6.6
-20.2
142.0
138.6
35.7
GLY-109
ILE-110
2.5
2.9
10.1
9.1
67.4
61.2
32.5
ILE-110
SER-111
5.6
5.8
-2.3
4.3
103.6
107.0
3.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-209
LEU-210
11.0
11.2
3.2
0.4
75.8
77.2
6.3
LEU-210
ILE-211
7.6
7.7
-6.3
4.7
158.7
149.7
-27.4
ILE-211
ASP-212
7.6
8.0
-11.8
25.0
128.7
134.2
62.2
ASP-212
SER-213
4.1
4.5
8.9
-3.1
121.8
112.5
-10.6
SER-213
LYS-214
2.3
2.5
9.1
-6.6
79.1
85.3
14.6
LYS-214
GLY-215
2.5
2.4
-26.0
15.7
35.5
38.3
26.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees