Hypothetical Protein Pm0188

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-247   ASN-248  5.3 5.1 -12.3 -9.1 37.9 29.8 66.8
 ASN-248   ASP-249  2.9 3.3 19.5 -1.7 82.3 86.8 19.2
 ASP-249   GLU-250  1.8 1.1 -1.3 -7.1 110.0 109.0 -23.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-330   ILE-331  8.6 9.4 -2.4 1.2 99.9 110.4 15.0
 ILE-331   PRO-332  5.6 6.2 -9.4 28.8 94.4 91.9 15.8
 PRO-332   ALA-333  7.6 8.4 -34.2 -0.1 53.3 39.1 78.5
 ALA-333   ASN-334  9.7 10.3 2.3 1.9 85.7 86.2 -2.1
 ASN-334   ILE-335  9.2 11.1 4.7 9.5 109.3 93.0 -27.9
 ILE-335   SER-336  5.8 7.8 19.2 23.7 176.6 163.5 -136.1
 SER-336   PHE-337  6.8 8.3 -39.6 9.9 64.0 75.3 1.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-387   TYR-388  13.4 14.7 11.1 3.9 62.5 48.4 31.0
 TYR-388   VAL-389  11.2 12.4 -14.1 7.1 63.2 65.6 2.0
 VAL-389   LYS-390  8.1 9.4 -2.2 -0.1 38.6 63.0 -1.3
 LYS-390   VAL-391  9.3 10.4 -4.9 15.7 106.9 128.4 39.9
 ARG-393   ARG-394  5.8 6.5 0.8 -4.6 116.9 100.4 18.6
 ARG-394   LEU-395  9.2 9.9 5.9 -8.7 61.3 47.8 -20.0
 LEU-395   GLY-396  10.0 9.7 5.5 -7.4 87.9 88.0 -0.5
 GLY-396   ILE-397  7.6 6.7 8.2 -3.2 26.2 38.2 23.3
 ILE-397   ILE-398  6.2 4.7 0.1 11.9 90.6 110.9 -30.2
 ILE-398   ASP-399  2.5 2.1 8.0 -1.2 170.4 154.8 -17.3
 ASP-399   GLU-400  1.7 1.5 37.9 -14.3 94.2 137.3 -52.4
 GLU-400   SER-401  1.9 0.9 3.9 17.8 77.5 95.4 25.4
 SER-401   GLN-402  4.6 3.2 180.0 18.1 11.8 77.5 -337.5
 GLN-402   VAL-403  3.9 6.4 136.8 22.7 77.2 12.8 359.2
 VAL-403   ILE-404  5.5 7.3 16.8 39.1 106.0 72.8 -12.3
 ILE-404   PHE-405  9.2 10.0 -11.2 -17.4 103.5 120.5 -26.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees