Asp/glu-Specific Dipeptidyl-Peptidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-284   ALA-285  2.5 2.0 -8.2 8.0 123.7 114.4 -4.5
 ALA-285   SER-286  4.6 3.8 -0.6 1.2 61.0 56.6 1.6
 SER-286   GLU-287  5.7 5.1 -2.4 2.5 89.2 88.4 -3.5
 GLU-287   VAL-288  3.7 3.5 -5.6 10.6 149.9 147.3 36.8
 VAL-288   ASP-289  4.6 4.5 -7.7 1.6 89.2 87.5 -15.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-336   ARG-337  18.3 18.8 4.3 1.6 78.7 83.0 -34.1
 ARG-337   ALA-338  15.5 16.0 -1.6 4.7 111.5 118.2 20.4
 ALA-338   ILE-339  14.6 15.1 -3.8 1.9 44.8 51.1 10.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-384   ALA-385  6.2 5.7 -3.9 5.7 85.4 78.4 1.2
 ALA-385   LYS-386  9.7 8.7 -8.7 10.2 33.8 33.1 5.4
 LYS-386   ARG-387  9.8 8.5 -2.9 2.8 90.8 96.0 -3.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-544   TYR-545  7.0 6.8 -28.6 -12.6 53.7 43.0 129.7
 TYR-545   ASP-546  5.2 5.5 -27.5 8.1 51.1 53.7 65.7
 ASP-546   ASP-547  5.9 6.8 12.4 -7.5 75.7 72.3 -30.9
 ASP-547   PRO-548  5.5 6.5 -6.7 5.3 82.0 80.1 -13.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees