Thermolysin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-103   VAL-104  2.5 2.5 1.7 -1.3 156.8 157.2 -29.5
 VAL-104   HIS-105  1.6 1.7 1.1 -0.3 127.0 127.0 -31.7
 HIS-105   TYR-106  3.7 3.7 -0.3 -0.2 93.1 92.9 10.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-123   ASP-124  3.1 3.0 1.2 -0.1 66.2 66.2 47.5
 ASP-124   GLY-125  0.3 0.2 -1.3 1.6 145.6 145.4 12.9
 GLY-125   ASP-126  2.7 2.6 0.1 0.4 39.1 37.3 22.5
 ASP-126   GLY-127  1.8 1.9 -2.2 0.0 120.1 120.1 -68.5
 GLY-127   GLN-128  2.9 3.0 0.9 0.4 45.1 45.5 12.3
 GLN-128   THR-129  4.8 4.9 -2.6 1.3 65.5 64.6 21.3
 THR-129   PHE-130  7.3 7.4 -1.5 0.5 30.1 30.7 48.7
 PHE-130   ILE-131  6.3 6.4 -1.4 2.0 82.8 83.1 -74.4
 ILE-131   PRO-132  5.4 5.3 3.0 -1.9 161.7 161.6 -41.5
 PRO-132   LEU-133  4.1 4.0 0.7 1.5 119.7 120.6 -117.9
 LEU-133   SER-134  6.0 5.9 -2.7 -1.2 31.7 32.9 210.7
 SER-134   GLY-135  6.3 6.2 0.7 0.6 79.4 79.2 5.0
 GLY-135   GLY-136  9.1 9.1 -1.3 -0.2 87.1 86.3 2.5
 GLY-136   ILE-137  11.4 11.3 3.8 -2.0 162.7 162.9 -80.7
 ILE-137   ASP-138  13.0 13.0 0.4 -1.2 97.7 97.3 -23.1
 ASP-138   VAL-139  14.8 14.7 4.0 -1.4 88.4 87.5 -42.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees