H-2 Class I Histocompatibility Antigen D-B Alpha Chain
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-178
LEU-179
14.7
15.4
-3.4
-1.9
36.9
40.5
38.2
LEU-179
LEU-180
16.7
17.2
50.3
-34.6
154.1
157.0
-159.0
LEU-180
ARG-181
18.0
18.1
45.4
-68.8
118.7
125.5
137.9
ARG-181
THR-182
14.8
14.8
5.1
-19.4
136.6
115.7
71.5
THR-182
ASP-183
12.8
12.5
9.6
8.7
97.2
115.9
-29.1
ASP-183
SER-184
9.2
9.0
24.4
-13.4
157.1
156.0
-72.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
CYS-203
TRP-204
6.7
7.0
-23.2
21.1
15.9
19.8
44.1
TRP-204
ALA-205
5.4
6.2
0.9
8.6
105.2
96.0
32.3
ALA-205
LEU-206
4.5
4.7
9.3
-7.4
170.3
172.3
-15.7
LEU-206
GLY-207
3.2
3.4
3.3
12.5
119.7
114.7
-57.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-208
TYR-209
6.9
6.7
-5.7
3.8
49.9
46.7
10.5
TYR-209
PRO-210
10.2
9.9
-1.9
-3.4
111.9
111.5
-9.4
PRO-210
ALA-211
13.0
12.6
14.4
-10.1
55.9
53.6
19.2
ALA-211
ASP-212
12.7
12.7
-12.1
10.6
17.6
17.4
14.8
ALA-211
ASP-212
12.7
12.7
-12.1
10.6
17.6
17.4
14.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-211
ASP-212
12.7
12.7
-12.1
10.6
17.6
17.4
14.8
ALA-211
ASP-212
12.7
12.7
-12.1
10.6
17.6
17.4
14.8
ASP-212
ILE-213
14.6
14.7
-20.2
18.8
47.3
49.7
-17.6
ILE-213
THR-214
12.5
12.3
1.8
-4.7
145.5
140.5
20.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-218
LEU-219
8.6
8.8
14.0
2.6
43.3
56.2
71.0
LEU-219
ASN-220
7.9
8.0
-79.6
-4.1
121.7
125.6
-356.5
ASN-220
GLY-221
6.4
5.5
130.8
17.1
125.1
58.1
44.5
GLY-221
GLU-222
9.3
9.1
-171.0
22.6
71.5
67.6
647.0
GLU-222
GLU-223
11.8
12.5
-143.1
-139.2
37.3
26.4
-637.1
GLU-223
LEU-224
12.6
13.4
19.3
-79.0
80.9
90.9
178.1
LEU-224
THR-225
13.7
14.4
-6.9
-7.0
45.4
22.1
65.9
THR-225
GLN-226
17.1
16.7
55.7
19.6
93.2
73.7
51.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-242
LYS-243
7.7
8.0
-7.1
10.7
50.0
51.4
30.9
LYS-243
TRP-244
9.6
9.9
-2.6
0.2
36.6
42.5
66.5
TRP-244
ALA-245
9.6
10.1
7.5
-20.3
137.2
134.5
75.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-261
TYR-262
7.5
7.6
-2.1
3.0
85.2
83.5
33.5
TYR-262
HIS-263
10.9
11.0
-3.3
-0.6
13.9
11.5
37.7
HIS-263
GLU-264
11.9
11.7
3.9
-30.7
106.8
100.1
26.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-266
PRO-267
11.9
11.5
12.3
-12.2
126.3
116.9
46.4
PRO-267
GLU-268
14.4
14.0
17.1
-17.1
150.0
152.3
-10.0
GLU-268
PRO-269
12.6
12.5
-2.1
12.5
97.1
90.1
9.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees