Lipase, Gastric

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-210   ILE-211  3.3 2.8 10.8 12.3 159.3 153.7 -14.0
 ILE-211   PHE-212  4.0 4.3 10.1 -42.9 118.1 128.2 15.3
 PHE-212   TYR-213  1.6 2.4 4.4 157.6 155.3 156.7 -117.1
 TYR-213   PRO-214  1.1 2.6 -75.1 -29.2 73.4 80.1 75.1
 PRO-214   HIS-215  2.9 6.4 -145.1 -138.1 99.9 30.2 99.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-220   PHE-221  13.5 10.8 -37.5 46.0 112.9 141.3 6.9
 PHE-221   LEU-222  13.3 11.2 168.2 -22.5 13.1 52.3 94.1
 LEU-222   ALA-223  14.2 7.6 17.0 -9.7 67.7 64.4 2.5
 ALA-223   THR-224  11.8 8.2 -23.5 -5.7 93.6 144.3 -12.5
 THR-224   GLU-225  9.1 11.1 3.6 -28.2 40.5 47.7 -16.7
 GLU-225   VAL-226  10.8 10.5 15.2 -44.2 32.7 69.9 -16.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-236   SER-237  2.7 1.5 -33.0 50.3 21.3 97.1 -3.4
 SER-237   ASN-238  2.1 4.5 -66.7 36.5 57.5 71.2 2.1
 ASN-238   ALA-239  1.6 5.7 -139.8 -24.1 61.6 8.8 103.2
 ALA-239   LEU-240  3.4 4.6 1.9 -15.7 73.0 111.5 5.6
 LEU-240   PHE-241  6.7 6.7 9.1 4.9 46.6 79.8 4.3
 PHE-241   ILE-242  6.5 9.5 3.0 -6.4 103.3 123.8 3.2
 ILE-242   ILE-243  6.3 9.9 13.7 5.8 118.4 149.4 -10.2
 ILE-243   CYS-244  9.0 10.0 -21.5 16.5 117.3 96.8 3.8
 CYS-244   GLY-245  10.9 12.5 -21.2 -0.9 168.4 130.5 -11.8
 GLY-245   PHE-246  10.4 14.2 29.9 -11.3 54.0 26.4 12.1
 PHE-246   ASP-247  7.7 13.8 146.4 -104.5 32.6 57.8 36.2
 ASP-247   SER-248  9.9 14.5 -60.9 79.5 98.8 116.5 12.0
 SER-248   LYS-249  9.5 11.3 -71.1 -26.8 156.8 121.3 -50.9
 LYS-249   ASN-250  11.3 12.7 56.8 -21.8 84.3 115.3 -3.1
 ASN-250   PHE-251  14.4 14.7 -17.9 -1.8 71.8 60.1 10.6
 PHE-251   ASN-252  12.8 11.9 -29.9 7.9 138.7 128.9 -14.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees