Excinuclease Abc, A Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-687   PRO-688  8.7 7.1 4.1 -31.3 67.8 53.6 -49.0
 PRO-688   ILE-689  9.1 6.9 -13.9 13.3 62.0 71.2 -1.8
 ILE-689   GLY-690  7.9 5.7 -169.1 73.7 45.9 65.0 207.8
 GLY-690   ARG-691  11.3 8.3 -51.8 14.5 92.7 135.1 -104.6
 ARG-691   THR-692  14.4 11.1 112.1 -2.3 76.6 109.7 -21.4
 THR-692   PRO-693  16.9 13.9 4.8 -14.4 29.9 33.8 -20.9
 PRO-693   ARG-694  17.6 16.3 -12.6 -8.8 78.8 82.4 11.6
 ARG-694   SER-695  17.3 16.3 39.8 -43.9 79.2 76.5 13.5
 SER-695   ASN-696  13.6 13.0 -5.1 23.0 166.1 165.0 46.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-836   ALA-837  3.0 4.1 -20.4 5.8 72.7 83.7 -5.5
 ALA-837   ALA-838  4.9 6.3 1.9 8.7 37.1 35.0 47.6
 ALA-838   GLU-839  6.0 6.7 19.6 -16.2 72.4 51.0 -0.4
 GLU-839   LEU-840  6.7 7.7 -26.9 -16.9 47.3 62.5 108.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees