D(-)-3-Hydroxybutyrate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-186   TRP-187  7.0 7.0 -11.7 2.4 68.8 61.0 27.7
 TRP-187   VAL-188  3.4 3.6 0.9 -3.2 141.6 138.1 23.0
 VAL-188   ARG-189  1.7 1.9 -7.5 -2.7 85.5 81.4 18.4
 ARG-189   THR-190  2.1 2.2 -1.7 -19.0 32.3 25.3 70.2
 THR-190   PRO-191  3.8 3.9 7.4 1.7 87.3 76.6 16.9
 PRO-191   LEU-192  7.3 7.7 9.9 10.6 47.8 56.0 37.9
 LEU-192   VAL-193  9.1 8.5 -12.1 -8.9 160.1 165.3 -83.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-215   LEU-216  4.4 4.3 -6.7 20.0 92.1 94.5 -2.5
 LEU-216   SER-217  0.6 0.7 -29.6 -20.6 28.7 28.8 151.6
 SER-217   GLU-218  0.4 0.4 13.8 11.2 108.7 112.3 -31.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees