Predicted Glycosyltransferases

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-194   PRO-195  5.1 5.5 5.9 -8.8 116.2 113.6 -5.7
 PRO-195   GLY-196  2.8 3.0 26.0 -61.7 146.5 148.1 28.2
 GLY-196   ALA-197  0.9 1.0 21.9 -89.9 142.0 139.6 65.5
 ALA-197   ASP-198  1.7 1.2 7.6 -1.3 98.1 104.5 7.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-385   ALA-386  9.2 9.6 6.6 -13.0 128.9 127.7 5.0
 ALA-386   ARG-387  5.6 5.9 20.8 19.2 121.0 110.3 -12.4
 ARG-387   THR-388  6.5 7.0 -8.2 5.8 40.1 9.9 -0.9
 THR-388   PHE-389  9.3 8.1 9.4 22.9 136.1 129.9 -33.0
 PHE-389   SER-390  8.0 4.9 84.9 -42.1 109.5 87.4 -10.9
 SER-390   TRP-391  4.4 3.7 -162.3 17.7 23.1 26.9 136.2
 TRP-391   ALA-392  3.6 3.2 -21.3 10.8 49.2 55.1 5.5
 ALA-392   ALA-393  7.0 6.7 -12.3 5.3 57.7 52.2 4.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees