Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-146   VAL-147  4.5 5.1 4.7 -12.2 59.3 57.2 1.0
 VAL-147   GLN-148  7.5 7.5 9.2 2.7 109.9 119.7 -3.2
 GLN-148   VAL-149  8.2 8.1 2.7 -6.1 78.0 87.6 -8.3
 VAL-149   ILE-150  5.3 4.9 4.1 4.2 17.2 26.2 46.8
 ILE-150   CYS-151  5.6 5.5 -6.7 10.1 102.4 90.9 -15.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-211   ALA-212  15.5 16.6 20.3 -14.5 108.1 96.2 11.2
 ALA-212   VAL-213  18.4 18.9 13.3 6.0 128.8 126.7 -70.2
 VAL-213   SER-214  16.7 17.1 176.4 -101.5 155.1 153.5 -455.1
 SER-214   ASP-215  15.4 19.5 149.8 -14.6 117.9 92.3 238.3
 ASP-215   MET-216  19.1 20.4 -147.1 10.8 71.1 63.4 495.0
 MET-216   ASP-217  20.5 24.0 5.5 79.4 141.8 158.2 -456.7
 ASP-217   GLY-218  18.2 23.0 -82.9 148.2 79.6 94.9 -65.1
 GLY-218   ASP-219  15.3 22.1 11.7 25.9 111.7 89.1 -32.4
 ASP-219   ARG-220  14.1 18.3 176.3 -86.1 38.2 34.3 520.2
 ARG-220   LEU-221  13.9 16.2 -153.7 78.3 112.2 74.5 -21.4
 LEU-221   SER-222  11.6 13.0 11.8 19.3 121.2 114.1 -57.3
 SER-222   GLN-223  11.3 13.4 3.4 0.4 54.7 52.6 13.0
 GLN-223   GLU-224  12.4 14.0 3.1 0.4 83.7 91.7 15.9
 GLU-224   GLU-225  9.3 10.9 -8.6 4.4 125.1 121.0 -20.7
 GLU-225   LEU-226  7.1 8.8 2.1 -8.9 17.5 9.4 -13.5
 LEU-226   VAL-227  9.4 10.3 0.0 4.3 112.2 111.2 15.4
 VAL-227   ALA-228  9.3 9.8 -2.6 5.0 100.7 85.5 1.6
 ALA-228   MET-229  5.7 6.3 -6.8 3.0 143.7 138.7 -21.5
 MET-229   ALA-230  4.9 5.4 1.3 -4.0 35.4 29.6 2.9
 ALA-230   MET-231  7.2 6.9 -0.8 -0.3 97.8 92.9 0.7
 MET-231   LEU-232  6.7 6.3 6.1 -0.6 67.3 83.4 4.7
 LEU-232   LEU-233  3.1 2.5 3.0 10.6 11.4 15.0 76.1
 LEU-233   LEU-234  2.9 2.2 -6.1 1.7 125.9 122.8 -22.5
 LEU-234   ILE-235  6.1 5.0 -1.8 -3.6 97.8 80.3 -3.5
 ILE-235   ALA-236  6.5 5.6 2.0 -15.1 54.7 71.4 -43.5
 ALA-236   GLY-237  4.0 3.7 16.0 -43.2 15.6 6.0 -122.3
 GLY-237   HIS-238  4.2 2.9 11.4 17.8 66.4 52.0 73.1
 HIS-238   GLU-239  7.8 6.2 -54.1 70.2 91.5 101.3 36.6
 HIS-238   GLU-239  7.8 6.2 -54.1 70.2 91.5 101.3 36.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-238   GLU-239  7.8 6.2 -54.1 70.2 91.5 101.3 36.6
 HIS-238   GLU-239  7.8 6.2 -54.1 70.2 91.5 101.3 36.6
 GLU-239   THR-240  9.0 9.3 -53.8 69.2 99.6 108.5 48.6
 THR-240   THR-241  7.9 8.4 20.8 -9.9 13.0 11.0 39.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees