Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-105   PHE-106  9.4 9.3 0.1 -0.3 120.8 121.4 -10.5
 PHE-106   MET-107  6.8 6.7 -4.2 6.1 129.4 131.5 31.1
 MET-107   SER-108  5.1 5.1 6.1 -3.3 31.1 34.7 76.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-192   GLU-193  8.6 8.5 0.2 -8.7 38.3 34.3 -202.1
 GLU-193   SER-194  7.6 7.9 -12.8 9.8 101.0 105.4 84.3
 SER-194   THR-195  4.5 4.8 10.5 -7.6 46.5 44.4 128.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-199   ILE-200  10.8 11.0 -5.0 6.0 124.9 129.0 94.6
 ILE-200   GLU-201  13.1 13.1 -4.3 0.1 103.0 103.9 66.1
 GLU-201   GLN-202  12.1 12.4 0.5 -6.9 129.5 128.9 87.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-216   SER-217  7.9 8.2 -4.7 -1.8 163.6 162.4 -105.3
 SER-217   LYS-218  8.1 8.3 1.2 -13.5 60.3 57.1 -134.0
 LYS-218   GLY-219  9.2 9.6 -5.6 24.6 158.5 144.5 368.0
 GLY-219   TYR-220  8.9 9.0 28.4 -18.7 63.4 72.8 54.4
 TYR-220   GLY-221  10.3 10.3 -11.4 18.7 152.7 155.5 119.1
 GLY-221   ILE-222  12.2 12.4 9.7 -10.6 61.6 61.8 -81.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-252   LYS-253  8.9 8.8 -5.2 3.4 76.6 75.5 -18.5
 LYS-253   TRP-254  11.4 11.3 2.9 4.0 47.1 48.3 76.1
 TRP-254   TRP-255  12.3 12.1 -9.3 7.6 162.9 165.8 -8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees