Bovine Mitochondrial F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-130   GLU-131  14.5 14.3 28.3 -10.5 87.3 94.0 -33.3
 GLU-131   ILE-132  14.3 13.9 55.0 -63.4 79.7 65.1 -40.8
 ILE-132   LEU-133  12.3 12.4 -4.2 -9.9 37.0 49.8 112.4
 LEU-133   VAL-134  11.3 11.3 -17.6 17.9 117.7 117.8 -30.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-149   GLY-150  7.6 7.9 0.4 -22.0 128.2 124.6 79.5
 GLY-150   LYS-151  6.0 5.9 -2.2 11.6 97.2 99.6 -17.8
 LYS-151   ILE-152  3.0 3.0 -5.1 -1.7 31.3 29.0 34.0
 ILE-152   GLY-153  0.1 0.1 -13.6 6.7 85.0 87.0 38.6
 GLY-153   LEU-154  3.4 3.6 25.5 -14.4 109.7 114.8 -47.9
 LEU-154   PHE-155  5.9 6.1 2.5 -8.0 112.3 112.8 -55.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-171   ASN-172  15.2 15.5 10.7 -5.9 110.3 107.8 6.4
 ASN-172   VAL-173  15.0 15.6 -24.2 14.6 116.9 123.7 2.2
 VAL-173   ALA-174  12.4 13.3 148.4 -126.6 33.4 28.0 176.1
 ALA-174   LYS-175  14.4 15.9 121.8 -106.7 104.1 104.6 23.6
 LYS-175   ALA-176  17.6 17.6 -62.8 46.7 75.0 103.9 8.1
 ALA-176   HIS-177  17.3 17.7 -82.8 70.6 118.5 131.4 -20.6
 HIS-177   GLY-178  15.1 14.9 9.3 65.8 9.3 35.6 473.0
 GLY-178   GLY-179  15.2 14.5 -87.8 -156.1 106.2 80.9 -277.0
 GLY-179   TYR-180  11.4 12.8 -128.9 12.5 96.1 123.9 -395.0
 TYR-180   SER-181  9.6 9.8 -26.1 -3.6 57.9 53.5 126.0
 SER-181   VAL-182  7.2 7.6 -5.3 -8.1 121.5 127.3 -15.0
 VAL-182   PHE-183  5.7 5.5 -24.3 22.6 45.7 46.3 22.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-331   THR-332  2.3 2.4 16.3 -18.2 97.7 91.6 15.2
 THR-332   THR-333  1.3 1.3 14.4 -7.9 78.0 75.8 35.1
 THR-333   VAL-334  4.8 4.9 9.5 -18.0 70.5 70.8 -27.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-352   SER-353  4.1 3.6 33.6 -26.6 27.4 24.0 28.0
 SER-353   THR-354  3.6 3.0 -2.8 -1.7 85.0 82.4 34.7
 THR-354   SER-355  2.2 2.7 6.6 5.9 34.8 29.9 65.1
 SER-355   ARG-356  4.9 5.3 -11.0 13.1 78.2 83.4 -17.1
 ARG-356   ILE-357  7.7 7.9 30.8 -77.9 92.5 90.8 -42.0
 ILE-357   MET-358  10.2 10.1 54.9 -36.7 138.9 105.7 -22.5
 MET-358   ASP-359  10.2 10.3 26.5 -17.5 126.2 143.0 -15.6
 ASP-359   PRO-360  13.3 13.4 25.8 7.0 83.6 79.1 -3.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees