Maltose/maltodextrin Import Atp-Binding Protein Malk

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-77   GLY-78  4.3 4.2 0.1 0.2 129.1 128.8 -0.1
 GLY-78   MET-79  4.3 4.0 0.2 -0.6 131.7 133.6 -8.0
 MET-79   VAL-80  7.0 6.6 4.6 17.6 147.5 145.1 -65.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-90   SER-91  17.8 18.5 -41.8 172.6 63.8 125.5 71.3
 SER-91   VAL-92  16.9 17.0 48.1 -1.8 118.8 109.5 -116.8
 VAL-92   ALA-93  13.7 13.5 7.6 3.1 157.7 156.4 -58.0
 ALA-93   GLU-94  15.5 14.8 -19.6 6.1 48.9 46.1 65.9
 GLU-94   ASN-95  16.9 16.2 5.2 1.5 104.7 93.0 48.8
 ASN-95   MET-96  13.7 13.7 129.1 -137.7 122.4 117.5 14.7
 MET-96   SER-97  10.6 10.9 -22.4 34.4 19.9 11.5 -74.8
 SER-97   PHE-98  12.6 12.8 122.2 -134.2 112.1 113.2 87.9
 PHE-98   GLY-99  13.0 13.5 -50.6 113.0 2.3 18.3 -398.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-115   GLN-116  15.0 15.0 -46.8 43.5 88.8 100.7 -23.9
 GLN-116   VAL-117  13.2 13.4 -51.8 59.6 118.9 130.7 18.8
 VAL-117   ALA-118  10.0 10.0 -39.9 35.0 159.3 163.4 -39.6
 ALA-118   GLU-119  12.1 11.8 39.4 2.8 127.4 123.7 -140.7
 ALA-118   GLU-119  12.1 11.8 39.4 2.8 127.4 123.7 -140.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-118   GLU-119  12.1 11.8 39.4 2.8 127.4 123.7 -140.7
 ALA-118   GLU-119  12.1 11.8 39.4 2.8 127.4 123.7 -140.7
 GLU-119   VAL-120  13.9 13.0 -34.3 61.0 110.2 83.0 122.5
 VAL-120   LEU-121  12.2 10.2 -129.6 118.9 80.8 37.6 45.7
 LEU-121   GLN-122  8.9 7.6 4.3 19.6 166.1 151.6 -84.9
 GLN-122   LEU-123  10.4 10.2 -28.6 55.3 84.6 80.8 -32.6
 LEU-123   ALA-124  11.0 10.9 -109.3 147.1 105.9 91.5 -46.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-145   ARG-146  5.4 5.5 -14.7 12.8 36.7 29.7 11.7
 ARG-146   THR-147  7.1 7.2 -19.7 7.9 42.7 39.9 82.5
 THR-147   LEU-148  4.2 4.5 9.7 -6.2 115.0 108.4 -15.8
 LEU-148   VAL-149  3.6 3.5 10.1 9.7 130.9 130.5 -84.7
 VAL-149   ALA-150  7.1 6.9 -40.9 14.5 30.5 10.3 178.7
 ALA-150   GLU-151  5.5 5.9 25.3 -24.5 129.6 117.3 -18.7
 GLU-151   PRO-152  4.4 4.6 30.0 -15.9 116.8 125.2 -66.6
 PRO-152   SER-153  0.6 1.0 66.6 -70.4 99.6 99.5 31.2
 SER-153   VAL-154  3.3 3.6 17.7 -14.3 46.0 53.0 27.9
 VAL-154   PHE-155  5.0 5.0 -26.0 17.2 138.3 132.3 -62.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees