Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
7.6
6.2
23.5
-6.8
110.8
115.5
-41.3
LEU-108
GLY-109
4.6
2.7
-28.6
37.0
137.7
137.1
16.4
GLY-109
ILE-110
3.2
2.6
-55.2
31.8
62.5
67.8
33.2
ILE-110
SER-111
5.1
4.7
-2.6
-5.4
58.6
67.1
30.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-211
ASP-212
7.8
7.9
-157.5
143.6
69.0
47.4
-27.7
ASP-212
SER-213
4.9
4.8
128.3
-103.8
71.5
57.8
45.9
SER-213
LYS-214
5.3
4.1
-7.8
6.4
77.5
67.4
21.6
LYS-214
GLY-215
4.1
3.6
21.8
-3.3
39.5
40.8
35.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-250
TRP-251
7.4
7.9
-2.9
-5.4
97.8
92.2
-8.7
TRP-251
ARG-252
4.2
4.7
15.6
108.8
146.7
148.0
-266.6
ARG-252
GLY-253
4.7
5.7
89.2
-50.6
124.7
81.6
5.5
GLY-253
ASN-254
1.8
5.9
-20.5
52.1
23.7
83.4
-96.8
ASN-254
GLY-255
2.4
6.2
86.3
135.8
108.5
144.8
412.2
GLY-255
CYS-256
5.6
4.9
-161.9
16.9
109.7
88.9
-51.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees