DNA Damage-Binding Protein 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-392   GLY-393  2.2 1.5 29.1 73.3 22.9 10.7 160.1
 GLY-393   ILE-394  0.7 1.0 16.7 -53.1 43.5 56.2 -46.4
 ILE-394   GLY-395  2.1 1.9 -17.2 35.5 110.8 113.1 -5.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-704   ASP-705  6.4 5.9 -48.8 57.0 136.0 135.6 10.6
 ASP-705   GLU-706  7.8 7.4 -144.5 93.3 97.2 97.1 47.3
 GLU-706   ILE-707  8.2 9.0 109.1 13.7 96.5 60.6 67.4
 ILE-707   GLN-708  7.2 7.5 94.4 102.9 30.2 61.4 -202.3
 GLN-708   LYS-709  7.1 4.5 -4.6 -126.6 118.7 132.8 245.6
 LYS-709   LEU-710  4.5 4.7 -108.6 1.3 99.6 104.6 -27.9
 LEU-710   HIS-711  4.7 4.4 -24.9 12.2 59.9 68.2 -0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees