Aminopeptidase T

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-174   GLN-175  1.6 1.6 1.3 -1.0 116.1 115.7 1.8
 GLN-175   ALA-176  4.6 4.6 0.9 -1.4 161.5 161.7 0.5
 ALA-176   THR-177  4.0 4.0 0.9 -2.0 126.3 125.9 3.2
 PRO-184   ILE-185  9.8 9.6 -35.2 64.2 21.2 29.2 -111.2
 ILE-185   ALA-186  11.1 11.1 1.7 -2.0 122.5 122.2 -2.0
 ALA-186   ALA-187  13.4 13.4 0.1 0.8 94.9 95.5 -1.3

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees