Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-519
THR-520
6.6
6.9
-8.0
2.3
41.6
36.4
12.1
THR-520
LEU-521
4.2
5.1
-10.1
10.5
118.3
113.9
14.5
LEU-521
GLY-522
1.6
2.7
7.0
-20.6
139.0
136.7
38.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-742
LEU-743
12.2
12.2
1.2
4.5
71.1
72.4
11.3
LEU-743
ILE-744
8.8
8.8
1.8
7.9
18.2
30.5
36.8
ILE-744
ASP-745
9.0
9.0
-22.2
14.2
129.0
136.0
-26.7
ASP-745
SER-746
5.5
5.6
10.7
-5.7
121.9
113.2
9.3
SER-746
LYS-747
3.0
3.2
-0.5
6.2
108.4
98.1
22.4
LYS-747
GLY-748
1.4
1.7
-14.0
-2.7
37.9
40.9
45.7
GLY-748
TYR-749
4.4
4.7
-5.6
2.2
71.0
72.6
-12.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees