Probable Phosphite Transport System-Binding Protein Ptxb

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-84   ALA-85  8.1 7.9 11.1 -31.6 66.1 65.2 -5.9
 ALA-85   MET-86  4.6 4.6 0.7 -22.4 137.1 141.6 27.6
 MET-86   VAL-87  3.0 3.5 18.6 -0.9 101.2 86.1 6.3
 VAL-87   ILE-88  0.6 1.8 -9.2 17.7 79.7 67.8 8.2
 ILE-88   ASP-89  4.4 5.6 -13.5 -2.9 95.3 94.8 3.4
 ASP-89   GLY-90  7.3 8.4 0.6 -8.9 101.2 82.1 5.8
 GLY-90   LYS-91  5.9 7.1 24.7 0.5 51.4 29.6 28.7
 LYS-91   PRO-92  4.9 5.9 -6.3 -12.2 129.8 113.4 -11.1
 PRO-92   THR-93  2.5 2.8 8.0 9.7 20.7 23.3 28.4
 THR-93   TYR-94  4.3 4.3 3.4 4.9 89.7 95.8 -15.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-199   TYR-200  8.3 8.2 10.7 -22.0 113.5 114.7 12.1
 TYR-200   PRO-201  4.6 4.5 10.6 24.1 42.3 45.0 43.0
 PRO-201   GLN-202  2.1 1.2 -11.3 21.2 101.8 106.3 26.9
 GLN-202   TYR-203  1.1 2.5 -23.3 3.5 81.7 72.5 2.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-253   MET-254  5.4 3.3 -10.1 -2.7 101.4 107.1 -6.1
 MET-254   GLY-255  3.7 2.0 9.2 -1.8 47.5 60.5 4.2
 GLY-255   SER-256  0.4 2.2 30.2 1.4 24.7 11.8 49.3
 SER-256   LEU-257  3.0 0.9 28.5 -4.6 64.5 61.5 25.0
 LEU-257   LEU-258  5.1 3.6 14.7 -8.1 73.7 83.8 12.5
 LEU-258   GLY-259  4.6 5.8 12.1 13.1 52.5 57.1 25.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees