Phosphoglycerate Kinase, Testis Specific

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-195   TYR-196  8.2 7.9 4.1 -0.8 69.1 72.7 -22.5
 TYR-196   PHE-197  6.6 6.3 4.8 -5.9 126.0 127.8 17.7
 PHE-197   ALA-198  3.6 3.2 -0.1 -12.1 24.4 17.5 23.4
 ALA-198   LYS-199  5.6 4.8 4.9 2.8 87.9 96.1 -7.1
 LYS-199   ALA-200  8.5 7.9 6.9 4.5 80.6 83.9 -6.9
 ALA-200   LEU-201  7.4 7.0 -12.6 25.0 42.2 33.1 -5.2
 LEU-201   GLU-202  5.9 5.4 -30.8 -33.3 28.9 38.0 180.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-211   LEU-212  13.0 12.9 -7.8 11.1 90.0 90.1 11.6
 LEU-212   GLY-213  13.6 13.2 12.8 -6.9 127.5 127.1 -27.7
 GLY-213   GLY-214  15.4 14.9 -69.2 79.9 83.6 86.7 -33.2
 GLY-214   ALA-215  15.5 16.3 -21.6 51.8 101.3 92.8 -4.4
 ALA-215   LYS-216  18.3 19.7 -44.1 -15.7 142.4 150.2 -167.0
 LYS-216   VAL-217  17.6 20.5 92.9 -29.6 37.1 44.2 159.4
 VAL-217   ALA-218  19.5 20.1 14.2 -9.7 26.1 44.6 4.4
 ALA-218   ASP-219  20.9 20.5 11.2 -22.4 59.2 87.2 -23.3
 ASP-219   LYS-220  17.4 17.5 61.7 -29.2 77.0 90.3 77.5
 LYS-220   ILE-221  15.2 15.1 29.5 -6.8 58.5 25.3 84.0
 ILE-221   GLN-222  17.7 16.1 -16.5 17.3 161.2 124.5 4.6
 GLN-222   LEU-223  16.6 12.9 -35.5 32.3 101.7 60.4 1.4
 LEU-223   ILE-224  13.0 11.0 -33.2 2.9 102.5 97.9 -21.4
 ILE-224   ASN-225  14.4 13.5 -4.0 -13.9 159.5 158.5 -57.6
 ASN-225   ASN-226  14.8 13.2 9.1 7.4 73.1 79.7 18.4
 ASN-226   MET-227  11.1 9.5 -11.9 -1.1 54.1 61.2 14.6
 MET-227   LEU-228  10.7 10.2 -6.7 7.8 105.7 112.5 -8.8
 LEU-228   ASP-229  13.8 13.4 -7.6 0.1 136.1 140.6 -25.3
 ASP-229   LYS-230  11.8 11.4 -5.6 4.4 64.5 69.6 23.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-392   SER-393  1.4 2.0 -9.6 38.1 120.9 118.3 50.5
 SER-393   THR-394  1.5 1.5 -2.5 -12.1 69.9 57.4 22.9
 THR-394   GLY-395  5.2 5.0 2.0 -24.1 46.0 56.9 -3.6
 GLY-395   GLY-396  5.7 6.1 -52.4 46.7 91.0 110.2 -37.5
 GLY-396   GLY-397  7.4 6.9 32.1 -16.4 20.7 29.0 48.4
 GLY-397   ALA-398  9.6 9.4 2.9 -1.8 51.8 44.3 3.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees