Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-519
THR-520
6.3
6.6
-13.5
0.4
41.4
36.6
32.9
THR-520
LEU-521
3.9
4.9
-22.2
19.6
118.1
111.5
-8.2
LEU-521
GLY-522
1.6
2.5
-7.8
-7.4
40.8
43.2
41.0
GLY-522
ILE-523
3.9
4.2
-2.0
7.3
116.0
117.6
8.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-742
LEU-743
12.4
12.2
6.1
1.4
71.5
70.4
19.3
LEU-743
ILE-744
9.0
8.9
-3.4
10.5
161.8
150.3
30.3
ILE-744
ASP-745
9.2
9.3
-21.5
16.3
128.7
134.2
-18.8
ASP-745
SER-746
5.6
5.8
10.0
-1.9
122.0
113.7
-1.9
SER-746
LYS-747
3.0
3.2
-0.9
10.1
108.0
98.3
31.7
LYS-747
GLY-748
1.2
1.5
-17.1
4.5
37.6
42.6
29.7
GLY-748
TYR-749
4.2
4.6
-8.9
5.5
70.6
70.2
5.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees