Bse634i Restriction Endonuclease

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-89   TYR-90  1.8 1.7 5.6 0.0 98.0 98.1 -0.8
 TYR-90   ARG-91  2.2 2.5 -3.2 -10.8 19.4 23.3 118.2
 ARG-91   VAL-92  2.0 2.6 18.1 -9.2 98.9 99.7 -64.5
 VAL-92   LYS-93  3.7 3.9 0.6 -4.0 112.2 114.3 31.4
 VAL-92   LYS-93  3.7 3.9 0.6 -4.0 112.2 114.3 31.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-92   LYS-93  3.7 3.9 0.6 -4.0 112.2 114.3 31.4
 VAL-92   LYS-93  3.7 3.9 0.6 -4.0 112.2 114.3 31.4
 LYS-93   ARG-94  6.0 6.3 4.3 -4.4 66.3 69.6 -5.1
 ARG-94   GLU-95  7.0 7.4 4.1 -3.6 18.0 17.2 2.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-96   ASN-97  5.4 5.7 -5.5 -4.7 48.4 45.4 93.2
 ASN-97   ASP-98  3.8 4.2 34.6 -29.1 121.1 128.8 -84.9
 ASP-98   TYR-99  4.1 4.4 7.5 -6.8 60.4 61.8 16.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-160   ASN-161  5.8 5.6 -0.7 -4.7 57.0 60.7 70.9
 ASN-161   LEU-162  6.0 6.0 7.2 -7.7 138.1 135.3 2.9
 LEU-162   PRO-163  8.5 8.5 5.5 -4.1 143.6 145.6 24.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-169   GLU-170  17.7 17.5 -18.1 24.1 17.5 21.7 -52.6
 GLU-170   ASN-171  16.4 16.2 -9.9 -3.4 78.3 82.1 52.6
 ASN-171   ILE-172  12.6 12.4 14.1 -7.9 88.8 72.8 25.8
 ILE-172   ASP-173  13.2 12.8 -8.8 12.1 32.2 42.1 -50.2
 ASP-173   VAL-174  15.2 15.2 0.1 -6.8 139.7 140.4 106.9
 VAL-174   ALA-175  12.4 12.5 4.2 -3.0 84.1 80.9 1.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-278   SER-279  10.3 10.0 -0.9 4.0 90.9 92.4 25.1
 SER-279   PHE-280  6.8 6.5 -6.7 5.1 161.3 164.6 -18.5
 PHE-280   GLU-281  4.6 4.4 -1.6 1.8 120.9 119.6 -3.4
 GLU-281   ASP-282  6.4 6.1 1.2 0.0 67.6 69.1 -3.4
 ASP-282   ILE-283  9.3 9.1 8.6 -10.6 27.6 25.9 -15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees