Chitinase A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-37   PHE-38  8.3 7.7 2.2 -3.5 161.9 165.1 6.5
 PHE-38   SER-39  7.7 7.2 -6.4 6.7 56.2 60.4 23.4
 SER-39   LYS-40  6.2 5.9 -2.7 -6.2 22.5 15.3 35.8
 LYS-40   ILE-41  4.7 4.5 10.7 -13.9 125.1 121.7 8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-56   TYR-57  10.6 10.4 10.6 -19.1 115.2 114.2 22.7
 TYR-57   HIS-58  6.9 6.6 11.4 -15.4 74.7 73.4 14.1
 HIS-58   GLU-59  6.1 5.2 -7.7 -6.6 84.9 79.4 27.1
 GLU-59   LEU-60  4.3 3.0 7.4 0.1 150.1 138.2 -31.6
 LEU-60   ALA-61  6.5 5.8 -8.3 -6.7 54.1 55.8 59.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-130   ILE-131  3.5 3.1 -3.5 -1.4 15.9 15.8 19.6
 ILE-131   ALA-132  3.2 2.7 5.2 -9.2 111.3 110.4 7.6
 ALA-132   ASP-133  3.6 3.1 -1.4 -2.9 20.7 18.7 16.7
 ASP-133   THR-134  3.3 3.2 4.9 -4.7 94.8 91.6 21.5
 THR-134   ASP-135  6.6 6.6 6.4 -3.0 84.8 85.4 10.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees