Bovine Mitochondrial F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-129   GLN-130  11.8 12.9 4.8 52.8 85.5 59.3 69.5
 GLN-130   GLU-131  8.6 9.4 21.3 -18.5 94.1 89.9 -23.5
 GLU-131   ILE-132  9.7 10.1 11.0 -20.4 70.7 61.0 -15.1
 ILE-132   LEU-133  8.5 8.6 0.5 14.1 28.7 30.9 34.3
 LEU-133   VAL-134  9.2 9.4 35.4 -30.1 87.4 89.0 -1.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-170   ASN-171  9.9 10.1 -23.5 20.4 90.5 94.2 0.6
 ASN-171   ASN-172  13.7 13.9 -1.4 13.5 146.5 149.3 24.7
 ASN-172   VAL-173  14.1 14.2 -14.6 60.4 104.3 96.5 65.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-329   ASP-330  5.8 5.7 -18.8 -4.3 28.0 29.6 51.3
 ASP-330   ALA-331  3.4 3.0 16.4 -33.7 105.1 103.0 19.2
 ALA-331   THR-332  2.4 2.9 10.4 13.5 53.5 42.6 77.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees