Apolipoprotein A-II

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-32   GLU-33  2.9 3.5 -1.3 6.4 96.7 70.2 1.5
 GLU-33   LEU-34  3.2 3.9 155.0 -177.6 113.4 136.8 35.2
 LEU-34   GLN-35  2.6 4.0 -6.4 93.7 53.9 74.1 -56.3

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees