Sthk_cnbd_cgmp

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-266   ARG-267  12.3 12.0 38.5 -25.7 129.8 120.5 -49.4
 ARG-267   ARG-268  13.4 13.7 -8.8 -7.4 80.3 71.4 -77.5
 ARG-268   GLY-269  17.1 17.3 4.9 40.6 62.2 85.0 119.2
 GLY-269   TYR-270  17.1 19.0 -40.2 16.8 58.9 61.6 175.8
 TYR-270   GLU-271  18.1 17.9 15.9 -49.2 91.3 56.8 -119.0
 GLU-271   GLU-272  18.4 17.3 2.4 32.2 151.9 133.0 -288.2
 GLU-272   ARG-273  16.0 15.3 -14.4 -14.3 93.3 90.2 156.3
 ARG-273   GLU-274  17.4 17.5 0.4 33.4 120.7 109.8 -173.3
 GLU-274   VAL-275  20.9 20.8 -34.8 17.7 29.6 20.2 51.9
 VAL-275   LEU-276  20.6 20.2 2.6 -40.7 128.6 136.5 331.8
 LEU-276   LYS-277  18.5 19.0 28.7 3.0 89.6 82.2 104.8
 LYS-277   GLU-278  21.6 21.6 -15.4 -28.2 40.8 43.9 360.1
 GLU-278   LEU-279  23.5 24.1 59.3 -3.0 144.0 151.2 -523.7
 LEU-279   PRO-280  21.3 21.4 -6.8 7.5 86.2 82.0 -42.8

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees