Thermosome Alpha Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-245   LEU-246  4.0 4.4 14.3 -4.0 26.6 22.1 78.7
 LEU-246   GLU-247  2.2 2.8 16.6 -4.9 100.3 99.1 -5.8
 GLU-247   VAL-248  1.6 1.4 14.7 -15.4 78.5 72.6 45.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-279   VAL-280  3.5 3.7 -1.1 -5.4 75.6 74.7 23.4
 VAL-280   ASP-281  4.1 4.2 -13.0 9.1 25.2 21.4 14.7
 ASP-281   HIS-282  4.2 4.2 2.4 -3.2 87.9 90.8 11.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees