Interferon-Induced, Double-Stranded Rna- Activated Protein Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-312   ALA-313  0.2 0.6 8.4 -3.5 98.1 97.6 -4.5
 ALA-313   LYS-314  3.8 4.2 -12.3 10.8 134.8 128.3 8.1
 LYS-314   LEU-315  4.2 4.7 5.5 -6.8 92.5 97.1 3.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-320   VAL-321  8.2 8.3 6.7 -6.8 27.4 25.1 -22.0
 VAL-321   HIS-322  6.5 6.6 2.5 -0.4 91.1 92.2 88.1
 HIS-322   TYR-323  4.5 4.6 -12.6 10.2 93.0 90.0 17.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-365   MET-366  3.7 3.6 -11.4 11.9 118.0 114.7 -13.5
 MET-366   GLU-367  2.3 1.9 -22.5 7.6 48.6 40.7 88.6
 GLU-367   PHE-368  4.6 3.7 9.6 -5.8 116.5 105.7 -5.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees