Epithelial Discoidin Domain-Containing Receptor 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-674   ILE-675  8.5 8.0 -2.2 4.5 41.1 40.0 8.0
 ILE-675   MET-676  7.4 6.9 -1.8 0.5 106.4 105.0 3.8
 MET-676   SER-677  5.2 4.8 -3.0 5.8 128.6 126.5 12.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-685   ARG-686  7.8 7.9 -0.5 -7.1 44.4 47.8 -14.6
 ARG-686   LEU-687  8.3 8.2 -1.1 -5.8 45.1 40.6 58.8
 LEU-687   LEU-688  5.7 5.8 5.1 -13.2 147.2 146.1 61.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-701   ASP-702  6.5 6.6 -1.7 2.2 99.4 95.5 -17.1
 ASP-702   TYR-703  10.3 10.3 -5.5 6.6 60.4 63.2 33.3
 TYR-703   MET-704  12.3 12.4 -0.5 1.3 62.9 46.6 51.3
 MET-704   GLU-705  14.7 14.1 -3.1 -12.5 83.2 87.3 58.5
 GLU-705   ASN-706  18.1 17.5 12.4 -27.8 161.5 142.6 120.2
 ASN-706   GLY-707  18.7 18.4 21.6 -2.0 123.7 120.5 -130.8
 GLY-707   ASP-708  15.9 15.7 3.2 0.8 130.3 139.7 -15.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees