Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-143   ASP-144  3.7 3.4 3.2 -2.3 13.7 14.2 4.8
 ASP-144   GLY-145  3.3 3.0 1.1 -0.6 81.6 81.1 15.6
 GLY-145   LEU-146  0.6 0.8 3.8 -2.9 102.0 101.7 27.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-169   LEU-170  2.2 2.3 -0.7 -2.9 119.3 117.1 -5.0
 LEU-170   GLU-171  5.3 5.4 4.7 5.8 40.1 38.5 110.9
 GLU-171   LEU-172  3.9 4.3 -8.4 0.8 73.7 73.6 -29.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees