Glutaminyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-31   PRO-32  11.1 11.6 -6.7 -4.7 70.9 75.9 -53.9
 PRO-32   PRO-33  11.7 11.7 -18.6 -11.2 64.8 53.4 132.2
 PRO-33   GLU-34  15.5 15.3 -73.6 72.8 54.4 81.4 59.5
 GLU-34   PRO-35  17.8 17.1 18.6 -7.2 64.7 70.5 93.7
 PRO-35   ASN-36  20.5 20.4 32.7 -2.9 133.1 133.4 -235.9
 ASN-36   GLY-37  22.5 22.5 15.8 -19.2 91.6 92.9 -0.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-64   PHE-65  11.6 11.7 15.9 -7.4 131.4 131.9 -42.3
 PHE-65   ASP-66  15.0 14.8 -43.6 35.1 53.1 43.7 32.5
 ASP-66   ASP-67  15.4 13.9 -23.8 6.7 82.5 67.6 137.0
 ASP-67   THR-68  18.7 17.1 42.8 -42.1 123.8 123.6 38.2
 THR-68   ASN-69  18.0 16.8 28.7 -54.0 56.9 46.9 -144.9
 THR-68   ASN-69  18.0 16.8 28.7 -54.0 56.9 46.9 -144.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-68   ASN-69  18.0 16.8 28.7 -54.0 56.9 46.9 -144.9
 THR-68   ASN-69  18.0 16.8 28.7 -54.0 56.9 46.9 -144.9
 ASN-69   PRO-70  20.9 19.7 -13.7 18.7 62.0 59.7 21.5
 LYS-72   GLU-73  27.3 23.8 -68.3 -30.7 63.0 22.1 897.5
 GLU-73   ASP-74  24.8 23.3 -168.4 158.2 74.5 55.2 -118.3
 ASP-74   ILE-75  27.5 25.7 86.0 -14.0 141.1 157.6 -719.0
 ILE-75   GLU-76  26.2 25.5 -129.2 115.8 75.8 72.5 183.9
 GLU-76   TYR-77  26.6 27.3 15.9 -16.9 71.9 79.5 27.2
 TYR-77   VAL-78  24.1 24.4 11.9 -6.0 54.9 51.8 0.6
 TYR-77   VAL-78  24.1 24.4 11.9 -6.0 54.9 51.8 0.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-77   VAL-78  24.1 24.4 11.9 -6.0 54.9 51.8 0.6
 TYR-77   VAL-78  24.1 24.4 11.9 -6.0 54.9 51.8 0.6
 VAL-78   GLU-79  21.1 21.6 0.2 11.4 32.6 36.0 110.5
 GLU-79   SER-80  22.8 23.7 -8.5 -2.7 77.1 82.1 31.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-81   LYS-82  21.1 21.2 -2.3 -2.8 37.0 27.7 56.0
 LYS-82   ASN-83  19.4 20.0 0.9 3.7 119.8 119.4 -45.1
 ASN-83   ASP-84  22.4 23.1 0.0 -3.4 114.9 108.2 4.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-98   SER-99  14.2 14.2 11.3 -10.2 128.3 129.7 24.4
 SER-99   SER-100  13.4 13.3 1.7 6.4 86.3 84.9 44.7
 SER-100   ASP-101  16.8 16.7 -23.5 14.6 136.8 131.8 -79.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-215   CYS-216  7.7 7.4 5.3 -7.0 106.7 107.0 40.6
 CYS-216   ILE-217  4.8 4.5 -0.6 -3.3 44.7 43.5 32.4
 ILE-217   SER-218  7.5 7.2 11.4 -7.2 155.2 150.8 -90.3
 SER-218   ASP-219  7.4 7.4 0.9 -7.1 65.8 63.1 -35.3
 SER-218   ASP-219  7.4 7.4 0.9 -7.1 65.8 63.1 -35.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-218   ASP-219  7.4 7.4 0.9 -7.1 65.8 63.1 -35.3
 SER-218   ASP-219  7.4 7.4 0.9 -7.1 65.8 63.1 -35.3
 ASP-219   ALA-220  3.7 3.7 9.5 -11.9 65.8 67.0 -22.8
 ALA-220   LEU-221  4.5 4.3 7.4 0.1 25.8 28.6 54.8
 LEU-221   GLU-222  6.8 6.7 -13.1 9.3 138.2 140.3 -12.0
 GLU-222   GLY-223  4.4 4.4 -2.3 -5.1 107.0 101.2 -0.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-227   LEU-228  5.0 5.3 8.5 -13.9 132.0 124.3 59.6
 LEU-228   CYS-229  8.6 9.0 -9.9 0.8 62.2 63.1 9.4
 CYS-229   THR-230  9.7 10.3 19.6 -17.2 128.4 131.4 -36.3
 THR-230   LEU-231  12.5 12.8 6.0 -1.9 147.4 149.2 -55.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-234   ASP-235  6.7 7.1 -8.1 6.0 56.5 54.8 40.9
 ASP-235   ASN-236  4.2 4.8 2.3 -6.3 55.4 56.5 -10.0
 ASN-236   ARG-237  3.9 4.1 2.2 2.5 56.0 54.8 78.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-250   VAL-251  10.3 10.6 52.4 -30.2 70.2 83.5 16.2
 VAL-251   HIS-252  7.3 7.3 4.4 -13.1 26.3 26.3 -82.0
 HIS-252   PRO-253  5.9 5.6 -4.2 -1.5 90.7 84.1 6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-255   TYR-256  4.8 5.0 6.4 -4.9 109.9 111.7 -13.8
 TYR-256   GLU-257  8.6 8.7 -1.8 -9.7 79.4 77.2 29.7
 GLU-257   PHE-258  10.6 10.8 -11.7 -1.3 100.8 90.4 20.7
 PHE-258   SER-259  14.2 14.5 -11.4 19.3 48.0 60.4 -39.5
 SER-259   ARG-260  16.7 17.1 -2.8 -12.9 111.8 124.8 -100.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees