Abc Transporter, Periplasmic Substrate-Binding Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-116
THR-117
6.7
7.0
-14.9
41.0
121.0
121.5
55.1
THR-117
ASP-118
3.0
3.4
10.0
-5.3
113.6
108.2
22.4
ASP-118
ALA-119
1.8
2.3
-6.2
8.1
119.6
99.8
9.8
ALA-119
GLY-120
4.0
4.0
-30.2
5.9
70.0
69.6
19.3
GLY-120
ILE-121
7.8
7.7
-2.8
-0.3
37.5
36.5
8.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-283
LEU-284
6.6
6.8
2.6
15.7
72.4
76.6
37.2
LEU-284
GLY-285
2.9
3.1
-4.5
-7.7
72.7
69.9
13.1
GLY-285
GLY-286
1.9
2.7
-4.7
23.7
105.3
102.5
23.4
GLY-286
TRP-287
3.8
4.3
-18.7
-0.6
50.9
48.0
32.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-340
PRO-341
2.5
2.6
4.6
-1.6
99.0
96.2
14.5
PRO-341
TRP-342
1.0
1.0
-0.1
5.0
135.5
137.2
2.8
TRP-342
PHE-343
3.3
3.2
-2.6
-0.9
145.4
143.3
2.0
PHE-343
ARG-344
1.9
1.7
-6.1
-17.3
92.5
85.2
11.5
ARG-344
ASP-345
5.5
5.2
-9.9
10.5
122.0
102.8
-6.7
ASP-345
LEU-346
7.0
6.8
-23.6
-12.7
175.8
166.2
-64.5
LEU-346
LEU-347
5.5
6.3
10.8
1.6
66.3
49.1
4.8
LEU-347
PRO-348
7.8
6.2
8.5
2.5
47.0
47.4
16.8
PRO-348
VAL-349
10.3
9.4
-14.5
1.4
143.2
133.3
-22.4
VAL-349
PHE-350
7.9
8.2
13.0
10.1
47.5
51.4
49.9
PHE-350
GLN-351
6.8
5.0
-17.0
-3.5
106.8
129.4
-39.1
GLN-351
ASN-352
10.6
7.8
-12.1
23.7
138.1
135.7
14.7
ASN-352
ALA-353
10.9
9.5
-8.5
10.0
129.5
120.7
-0.9
ALA-353
VAL-354
7.6
6.8
-1.9
44.2
162.5
165.3
102.1
VAL-354
SER-355
8.0
8.1
-12.8
14.9
118.0
125.5
-8.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees