Cytochrome P450cam

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-99   PRO-100  5.0 4.9 4.9 -5.6 136.7 132.9 -47.4
 PRO-100   THR-101  4.6 4.6 17.0 27.2 100.2 105.0 -45.1
 THR-101   SER-102  8.0 8.0 -29.8 -3.8 128.0 134.5 -74.9
 SER-102   MET-103  10.1 10.3 20.8 -26.7 32.6 33.7 -23.7
 PRO-105   PRO-106  11.0 9.7 173.4 28.3 20.6 80.9 -143.2
 PRO-106   GLU-107  10.2 8.1 -15.8 1.1 79.5 66.5 18.1
 GLU-107   GLN-108  6.5 4.5 -25.7 20.1 25.7 5.1 36.8
 GLN-108   ARG-109  6.0 5.9 -19.6 -1.0 70.8 68.0 14.5
 ARG-109   GLN-110  7.2 7.8 -7.3 4.2 92.8 87.3 -24.8
 GLN-110   PHE-111  5.3 6.0 -16.6 15.2 49.2 44.5 24.6
 PHE-111   ARG-112  2.4 3.0 -20.5 1.0 22.3 24.4 109.8
 ARG-112   ALA-113  4.7 5.2 1.3 6.4 105.4 100.4 -56.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-116   GLN-117  6.4 7.6 -12.5 15.5 101.6 98.1 37.5
 GLN-117   VAL-118  8.8 9.7 -7.9 4.3 137.8 138.1 -54.4
 VAL-118   VAL-119  7.4 8.1 1.9 -1.4 30.6 26.4 19.2
 VAL-119   GLY-120  5.3 6.5 6.0 14.5 78.8 78.8 47.7
 GLY-120   MET-121  7.8 9.3 -17.1 9.9 135.9 147.8 -52.0
 MET-121   PRO-122  10.8 11.8 -3.5 16.3 98.8 99.2 55.8
 PRO-122   VAL-123  13.1 14.1 -16.5 7.9 108.4 108.3 -34.3
 VAL-123   VAL-124  11.0 11.7 -17.0 4.9 163.6 160.4 -73.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-132   GLU-133  10.4 9.2 17.1 -17.6 57.5 63.4 24.8
 GLU-133   LEU-134  12.3 11.6 9.4 6.1 76.5 88.9 85.5
 LEU-134   ALA-135  10.1 9.7 -5.1 -0.3 130.7 131.3 -27.4
 ALA-135   CYS-136  7.0 6.5 10.9 -1.7 19.6 21.2 50.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-155   GLU-156  6.4 6.4 -15.5 23.7 148.0 140.7 54.0
 GLU-156   PRO-157  8.8 9.3 11.7 -12.2 80.8 76.7 13.0
 PRO-157   PHE-158  9.5 9.6 17.7 -9.0 74.2 68.0 8.7
 PHE-158   PRO-159  6.3 6.3 -4.6 7.6 159.1 164.0 34.2
 PRO-159   ILE-160  4.7 5.0 6.7 2.1 49.5 52.5 58.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-226   GLN-227  9.7 9.3 -8.8 7.3 25.5 13.0 19.5
 GLN-227   VAL-228  8.4 8.2 11.2 -27.0 82.7 94.7 69.2
 VAL-228   ASN-229  5.5 5.0 25.4 8.2 143.2 173.6 -200.1
 ASN-229   GLY-230  7.6 5.0 -11.5 -25.4 41.6 58.1 127.7
 GLY-230   ARG-231  9.3 8.3 59.8 -55.8 97.1 92.3 -11.4
 ARG-231   PRO-232  7.4 8.2 21.1 -1.5 39.5 22.1 119.8
 PRO-232   ILE-233  8.8 9.4 3.9 25.0 74.5 71.0 8.1
 ILE-233   THR-234  6.9 7.2 4.1 -5.2 99.2 99.9 -14.0
 THR-234   SER-235  8.6 8.6 4.6 0.8 32.1 29.4 37.6
 SER-235   ASP-236  11.3 11.2 -11.2 8.7 110.9 112.2 -0.2
 ASP-236   GLU-237  10.4 10.0 -0.9 2.5 122.2 116.9 -0.6
 GLU-237   ALA-238  6.7 6.2 -6.0 1.4 153.4 152.8 -30.3
 ALA-238   LYS-239  7.8 7.5 -7.7 -0.6 133.5 137.5 -48.8
 LYS-239   ARG-240  10.1 9.6 6.7 5.1 67.4 68.8 47.8
 ARG-240   MET-241  8.2 7.5 -13.1 13.8 125.8 124.3 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-250   ASP-251  8.0 6.6 -65.3 82.2 116.5 122.5 62.1
 ASP-251   THR-252  8.8 9.2 -64.7 62.6 94.5 104.3 24.0
 THR-252   VAL-253  6.8 7.8 21.6 -12.1 26.7 34.0 32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees