Glucosamine-6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-137   VAL-138  8.2 8.3 4.0 -7.8 83.8 87.6 -12.3
 VAL-138   GLY-139  11.2 11.5 3.4 7.1 45.6 40.7 135.6
 GLY-139   ASN-140  14.1 14.4 -1.0 -4.4 143.4 139.2 -53.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-142   HIS-143  16.5 16.4 -11.9 5.1 162.3 150.8 -96.4
 HIS-143   ILE-144  16.7 17.1 11.0 -3.7 65.2 65.4 175.5
 ILE-144   ALA-145  14.0 14.8 7.3 -12.1 55.9 70.2 106.6
 ALA-145   PHE-146  14.1 14.7 3.0 14.9 119.1 112.4 -54.6
 PHE-146   ASN-147  17.8 18.4 -23.2 14.2 105.3 104.8 -0.3
 ASN-147   GLU-148  19.1 19.6 58.9 -26.3 151.5 147.7 -499.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-153   ALA-154  21.5 20.3 1.4 4.1 19.1 25.2 69.0
 ALA-154   SER-155  21.3 20.3 -5.7 7.0 105.9 93.5 35.9
 SER-155   ARG-156  21.0 20.6 4.7 -14.1 63.9 66.8 30.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-202   VAL-203  4.3 4.3 -2.9 1.6 138.2 138.2 -25.6
 VAL-203   LEU-204  6.1 6.2 -5.4 1.0 148.2 148.3 -52.0
 LEU-204   GLY-205  4.8 4.8 -0.3 1.9 137.4 135.9 29.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-224   THR-225  20.0 20.2 1.0 12.7 27.1 28.7 203.7
 THR-225   ILE-226  18.7 18.6 -26.4 13.6 93.0 91.0 -110.8
 ILE-226   SER-227  15.4 15.5 -13.7 6.3 98.9 96.4 -45.8
 SER-227   CYS-228  18.0 18.1 -15.9 -9.9 165.0 160.5 -405.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-233   LYS-234  15.1 14.7 -10.9 -3.3 64.5 60.3 107.7
 LYS-234   ALA-235  12.0 11.8 1.3 0.7 129.9 135.2 -13.6
 ALA-235   ILE-236  10.8 10.9 -1.4 3.8 40.8 40.1 -48.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-241   PRO-242  5.9 6.0 0.7 0.1 69.4 68.9 -35.5
 PRO-242   SER-243  6.2 6.2 3.4 -2.3 127.9 125.7 16.6
 SER-243   THR-244  8.2 8.2 0.6 8.7 96.2 90.8 32.1
 THR-244   MET-245  10.5 10.6 -1.9 8.8 143.4 139.1 86.0
 MET-245   GLU-246  11.9 12.1 -7.7 -2.0 86.2 82.2 -3.9
 GLU-246   LEU-247  15.2 15.5 -0.1 -1.8 57.4 60.9 20.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees