Dihydrodipicolinate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-22   ASP-23  14.5 14.5 -3.6 3.6 79.6 79.8 274.3
 ASP-23   GLU-24  12.4 12.4 -1.3 2.0 36.5 35.2 -66.5
 GLU-24   GLN-25  11.4 11.4 -0.5 -1.1 80.7 80.4 35.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-29   LEU-30  4.2 4.2 -0.7 2.6 64.0 62.5 232.5
 LEU-30   ILE-31  1.8 1.8 0.1 1.3 49.1 49.2 98.3
 ILE-31   LYS-32  2.2 2.2 4.7 -6.8 64.9 65.1 -91.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-41   VAL-42  10.6 10.6 -3.6 5.5 142.4 140.7 79.3
 VAL-42   VAL-43  9.4 9.3 -3.0 1.2 86.0 87.8 -26.2
 VAL-43   PRO-44  12.0 12.0 -2.2 5.6 112.3 113.8 178.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-47   THR-48  17.0 17.1 -0.3 4.6 62.7 62.8 68.5
 THR-48   GLY-49  13.4 13.5 0.0 -1.7 72.8 72.6 109.9
 GLY-49   GLU-50  12.9 13.0 -2.2 -0.4 76.1 76.4 86.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-52   THR-53  21.4 21.3 -5.5 4.6 95.5 92.7 -56.9
 THR-53   LEU-54  20.8 20.8 2.3 -4.2 135.4 135.9 96.8
 LEU-54   THR-55  19.6 19.5 -2.8 4.4 55.0 54.0 108.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-65   ALA-66  8.7 8.7 -1.3 0.7 89.8 90.2 -11.9
 ALA-66   VAL-67  7.3 7.2 0.0 3.8 21.0 19.4 165.7
 VAL-67   GLU-68  7.6 7.6 -2.1 0.1 111.2 111.9 22.1
 GLU-68   THR-69  5.7 5.7 0.0 -0.8 66.2 66.5 -121.9
 THR-69   CYS-70  3.0 3.0 1.3 0.5 72.7 73.0 -157.7
 THR-69   CYS-70  3.0 3.0 1.3 0.5 72.7 73.0 -157.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-69   CYS-70  3.0 3.0 1.3 0.5 72.7 73.0 -157.7
 THR-69   CYS-70  3.0 3.0 1.3 0.5 72.7 73.0 -157.7
 CYS-70   LYS-71  3.3 3.4 2.1 0.2 15.2 17.1 268.7
 LYS-71   GLY-72  2.4 2.2 3.4 -1.3 85.7 88.2 -114.2
 GLY-72   THR-73  2.7 2.8 -0.6 -1.9 50.8 50.6 162.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees