Glycogen Synthase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-212   VAL-213  3.1 3.1 -12.9 -8.4 53.4 34.8 95.9
 VAL-213   SER-214  2.8 3.3 2.0 5.8 86.3 92.5 -32.1
 SER-214   PRO-215  3.1 3.0 0.1 -2.5 46.6 50.1 -0.5
 PRO-215   SER-216  4.5 4.0 -0.9 -4.7 150.8 158.0 -57.0
 SER-216   TYR-217  5.7 5.3 5.7 -1.3 62.6 60.1 38.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-236   ARG-237  10.5 10.5 -39.1 57.7 25.4 14.5 -114.7
 ARG-237   ALA-238  10.8 10.5 -57.1 -1.1 58.4 64.4 109.6
 ALA-238   HIS-239  8.5 8.7 -19.8 4.0 48.5 98.7 7.6
 HIS-239   VAL-240  11.7 11.8 -19.1 44.5 23.9 54.8 -111.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-242   GLY-243  5.6 5.4 21.3 7.3 79.6 66.7 78.9
 GLY-243   ILE-244  2.5 2.3 19.4 -10.5 19.2 13.9 39.8
 ILE-244   VAL-245  1.9 1.6 -7.5 -6.5 105.1 101.5 -32.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-248   ASP-249  8.1 8.4 -21.7 1.4 7.9 17.2 69.7
 ASP-249   ALA-250  8.8 8.9 15.6 10.6 113.4 127.0 -47.1
 ALA-250   ASP-251  9.6 9.9 -18.7 18.2 15.2 48.0 -1.8
 ASP-251   VAL-252  9.9 11.1 10.0 -40.9 86.3 69.1 -9.6
 VAL-252   TRP-253  13.0 14.0 25.8 -31.1 62.7 58.5 28.4
 TRP-253   ASN-254  14.0 14.4 -7.1 -6.6 65.0 66.1 26.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-460   TRP-461  5.9 4.7 -25.5 -7.0 62.7 71.7 50.4
 TRP-461   GLU-462  2.9 1.9 5.5 -16.3 76.7 72.4 -11.8
 GLU-462   LYS-463  1.4 1.3 12.4 -5.2 127.6 126.9 12.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees