Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  PHE-296   THR-297  7.4 5.9 5.0 17.6 47.8 50.1 18.7  THR-297   GLY-298  6.0 4.8 -33.4 17.7 79.8 79.1 -2.0  GLY-298   LEU-299  4.0 3.5 4.2 -51.6 94.0 85.7 -3.2  LEU-299   PRO-300  2.2 3.5 28.3 13.4 28.0 39.6 30.0  PRO-300   HIS-301  2.0 5.9 -16.3 140.9 105.1 65.8 -10.0  HIS-301   ARG-302  5.0 9.4 -146.9 -60.8 68.5 51.0 -154.3  ARG-302   PHE-303  8.3 8.8 146.1 168.0 55.6 55.8 248.6  PHE-303   GLU-304  9.0 10.8 -109.3 16.5 136.3 137.3 -38.1  GLU-304   VAL-305  7.4 8.3 -1.2 14.5 143.9 157.2 6.4  VAL-305   VAL-306  8.6 9.1 3.4 -12.0 51.1 55.8 -0.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees