Gdp-Mannose-Dependent Alpha-(1-2)-Phosphatidylinositol Mannosyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-130   GLN-131  14.8 11.9 146.1 -2.4 91.8 56.7 37.7
 GLN-131   GLY-132  13.4 9.5 163.0 164.3 33.8 68.6 -32.4
 GLY-132   ILE-133  14.7 8.5 -54.0 -3.2 132.7 43.6 -0.6
 ILE-133   LEU-134  13.0 8.6 157.6 11.5 77.1 93.2 -9.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-156   GLU-157  14.4 14.9 6.3 7.5 75.6 65.0 3.9
 GLU-157   ALA-158  14.3 11.9 14.5 -27.8 146.3 52.7 5.9
 ALA-158   LEU-159  14.1 13.4 58.0 22.7 104.9 119.9 -84.3
 LEU-159   GLY-160  10.9 14.1 146.1 45.1 48.3 93.3 105.0
 GLY-160   SER-161  9.4 13.4 130.5 13.4 91.8 31.4 107.2
 SER-161   ASP-162  10.6 14.5 42.9 -93.1 85.2 85.8 -27.9
 ASP-162   ALA-163  14.0 13.9 -24.8 166.6 42.9 89.0 -17.3
 ALA-163   VAL-164  17.2 16.4 -99.7 40.6 123.5 121.8 -28.4
 VAL-164   GLU-165  20.7 19.6 -11.6 -2.3 76.2 75.8 4.5
 GLU-165   ILE-166  24.0 22.7 -7.1 12.0 77.4 87.6 -11.3
 ILE-166   PRO-167  26.9 25.7 30.4 -8.3 114.3 108.1 -3.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees