Glucokinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-107   ILE-108  3.0 3.0 6.7 1.0 93.3 98.5 -32.2
 ILE-108   PRO-109  2.4 2.1 -3.4 8.7 109.3 105.7 4.0
 LEU-111   LYS-112  6.0 5.6 6.0 -20.9 106.9 102.3 18.2
 LYS-112   LYS-113  9.0 8.6 9.8 7.3 133.4 140.9 -115.9
 LYS-113   GLU-114  9.9 9.4 -8.0 8.6 29.3 34.6 -30.0
 GLU-114   HIS-115  8.6 7.9 -23.7 16.4 95.6 96.0 43.7
 HIS-115   LEU-116  5.2 4.5 -7.0 3.2 92.1 97.0 53.0
 LEU-116   ILE-117  5.7 5.3 2.9 -5.9 140.5 139.8 32.7
 ILE-117   GLN-118  7.3 7.2 7.7 -7.8 62.5 63.4 -12.5
 GLN-118   PHE-119  10.7 10.5 -6.8 4.4 62.0 56.7 21.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-145   HIS-146  6.2 6.2 -5.2 8.6 69.6 69.0 -9.2
 HIS-146   VAL-147  6.2 6.4 -3.5 13.6 11.0 16.5 -45.8
 VAL-147   ASP-148  5.8 6.2 -15.1 17.0 71.1 70.1 -62.6
 ASP-148   LYS-149  7.0 7.9 -158.9 -172.4 129.9 137.6 219.9
 LYS-149   ARG-150  8.1 7.8 -9.8 19.1 114.2 114.6 -25.4
 ARG-150   TRP-151  4.7 4.2 -8.1 1.5 123.4 134.3 -10.3
 TRP-151   VAL-152  2.6 2.3 -7.6 3.8 73.1 72.8 -39.1
 VAL-152   SER-153  1.6 1.9 -18.4 8.0 130.9 135.5 -51.7
 SER-153   LEU-154  4.2 4.2 5.1 -2.6 118.9 121.0 -28.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-298   ILE-299  5.9 5.9 -8.6 -0.2 80.0 77.0 28.3
 ILE-299   VAL-300  2.2 2.3 -0.1 3.8 145.1 142.6 34.2
 VAL-300   HIS-301  0.4 0.1 -4.6 -4.6 81.7 83.4 41.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees