Glutamate Dehydrogenase 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-19
GLY-20
3.8
2.9
-12.0
-5.3
113.0
110.4
-16.0
GLY-20
ALA-21
3.2
2.8
24.7
-6.9
114.4
101.9
-22.3
ALA-21
SER-22
2.0
2.5
-22.9
27.1
33.2
38.7
21.9
SER-22
ILE-23
2.9
3.1
-34.6
22.4
95.0
102.4
46.3
ILE-23
VAL-24
6.3
5.9
-5.4
35.9
103.7
109.0
25.1
VAL-24
GLU-25
7.5
7.2
-55.7
36.6
61.2
49.6
73.6
GLU-25
ASP-26
7.4
8.1
-57.5
45.2
70.8
71.4
34.3
ASP-26
LYS-27
10.5
10.4
-39.1
22.0
136.2
132.0
-78.5
LYS-27
LEU-28
12.3
12.5
-8.3
13.8
115.3
123.6
-28.3
LEU-28
VAL-29
11.8
12.1
37.5
-51.6
125.8
108.5
28.8
VAL-29
GLU-30
13.6
14.7
-17.3
-2.5
92.2
81.4
14.6
GLU-30
ASP-31
15.8
16.9
-10.4
-12.4
135.8
135.8
-180.7
ASP-31
LEU-32
17.3
18.5
24.0
-41.2
79.5
22.5
-55.7
LEU-32
LYS-33
17.4
17.3
-112.0
-90.9
60.6
93.0
-216.6
LYS-33
THR-34
21.2
19.3
-70.0
27.1
84.9
25.0
351.3
THR-34
ARG-35
22.3
21.0
-107.0
-46.9
43.4
90.3
461.4
ARG-35
GLU-36
25.3
24.6
45.0
-56.9
148.0
91.4
-14.9
GLU-36
THR-37
23.5
24.9
10.5
-20.1
106.0
126.1
41.0
THR-37
GLU-38
21.1
22.9
-31.8
93.5
19.4
65.6
-356.7
GLU-38
GLU-39
19.0
23.7
-111.2
162.4
95.5
43.0
-329.1
GLU-39
GLN-40
15.5
22.6
17.1
102.4
68.2
89.8
-534.6
GLN-40
LYS-41
16.8
19.2
59.5
-47.4
28.0
91.6
125.6
LYS-41
ARG-42
15.6
18.5
76.7
-38.4
90.1
19.2
120.3
ARG-42
ASN-43
12.1
17.1
21.6
7.6
73.8
97.0
51.2
ASN-43
ARG-44
13.1
13.8
-8.1
10.9
162.2
105.2
64.5
ARG-44
VAL-45
14.5
14.8
16.6
-7.2
56.8
12.6
66.3
VAL-45
ARG-46
11.2
14.8
52.1
-12.6
94.0
72.0
55.8
ARG-46
SER-47
9.3
11.0
53.0
-21.6
62.8
78.9
108.1
SER-47
ILE-48
12.3
12.6
20.6
10.0
12.4
13.2
209.9
ILE-48
LEU-49
11.7
12.2
-3.9
-5.4
101.5
97.7
-2.4
LEU-49
ARG-50
8.0
8.5
10.4
-6.8
94.8
104.3
-30.1
ARG-50
ILE-51
9.9
10.2
14.7
-14.7
38.4
41.4
22.3
ILE-51
ILE-52
12.0
12.1
-19.1
13.1
142.0
131.6
-65.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-205
GLY-206
9.4
9.4
23.3
-33.0
54.5
56.6
15.7
GLY-206
GLY-207
6.1
6.0
22.9
-10.5
42.5
36.9
111.3
GLY-207
ILE-208
6.2
5.5
7.5
3.6
99.9
99.2
-26.0
ILE-208
HIS-209
4.8
3.4
-20.7
-7.5
91.9
87.3
-32.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-379
VAL-380
3.5
3.5
0.1
7.5
7.2
7.4
64.6
VAL-380
SER-381
4.4
3.7
-10.4
0.1
110.2
102.2
-116.0
SER-381
TYR-382
3.4
2.6
11.9
-1.0
83.7
88.9
26.1
TYR-382
PHE-383
0.7
1.5
-14.8
11.3
150.4
160.3
15.3
PHE-383
GLU-384
1.8
2.1
-17.5
21.0
136.2
131.0
37.1
GLU-384
TRP-385
1.6
1.4
-15.9
16.3
90.7
86.9
-33.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-457
GLU-458
11.6
11.2
6.4
-2.8
59.2
59.7
-1.6
GLU-458
ARG-459
14.8
14.5
-11.1
4.6
127.7
129.2
-28.9
ARG-459
SER-460
13.6
13.7
19.6
-17.1
34.5
40.9
30.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-483
ASN-484
5.5
5.2
-24.1
26.8
139.0
139.3
66.9
ASN-484
ALA-485
6.7
7.2
11.4
-14.9
69.2
62.1
-35.6
ALA-485
ILE-486
3.4
4.2
-12.6
14.5
54.9
58.8
-20.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees