Nf-Kappa-B P65

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ASN-186   ARG-187  9.2 9.1 2.2 10.8 119.5 124.3 -29.5  ARG-187   ALA-188  5.6 5.5 -55.5 13.3 34.0 31.9 159.6  ALA-188   PRO-189  6.4 5.9 -42.3 13.0 42.7 46.0 70.1  PRO-189   ASN-190  5.6 6.5 16.0 11.6 117.9 120.0 -58.5  ASN-190   THR-191  9.2 9.2 -72.7 39.6 133.4 128.8 -88.7  THR-191   ALA-192  11.2 11.1 44.6 -20.3 65.1 63.1 45.8 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees